RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TAS2R42Q7RTR8 314 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 ASCL5Q7RTU5 278 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 FAM228AQ86W67 206 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 SLC22A9Q8IVM8 553 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 STPG2Q8N412 459 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 MS4A15Q8N5U1 240 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 EID2Q8N6I1 236 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 AKR7LQ8NHP1 331 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 GPR151Q8TDV0 419 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 CXorf40AQ8TE69 158 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 PIK3IP1Q96FE7 263 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 WFIKKN1Q96NZ8 548 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 TCHPQ9BT92 498 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 MRPL37Q9BZE1 423 aaKnown RBP2.39□□□□□ -2.03
CD46-216ENST00000490278 RPF2Q9H7B2 306 aaKnown RBP2.39□□□□□ -2.03
CD46-216ENST00000490278 NOX3Q9HBY0 568 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 OR12D3Q9UGF7 316 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 CTNNA3Q9UI47 895 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 STARD10Q9Y365 291 aa2.39□□□□□ -2.03
CD46-216ENST00000490278 F6UB75 175 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 UQCRFS1P1P0C7P4 283 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CALM1P0DP23 149 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CALM2P0DP24 149 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CALM3P0DP25 149 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 HRH1P35367 487 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CYB561P49447 251 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 SSR4P51571 173 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 NUTF2P61970 127 aaKnown RBP2.38□□□□□ -2.03
CD46-216ENST00000490278 YWHAGP61981 247 aaKnown RBP eCLIP2.38□□□□□ -2.03
CD46-216ENST00000490278 ECH1Q13011 328 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CLINT1Q14677 625 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 VPS26BQ4G0F5 336 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 HES5Q5TA89 166 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 IGFL3Q6UXB1 125 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 ZNF836Q6ZNA1 936 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 ABHD13Q7L211 337 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 PDIK1LQ8N165 341 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 LIX1Q8N485 282 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CYB561D1Q8N8Q1 229 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 B3GNT7Q8NFL0 401 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 OR10G4Q8NGN3 311 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 OR1S2Q8NGQ3 325 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 OR10R2Q8NGX6 335 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 LKAAEAR1Q8TD35 194 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 TSNARE1Q96NA8 513 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 ILKAPQ9H0C8 392 aaPredicted RBP2.38□□□□□ -2.03
CD46-216ENST00000490278 CWH43Q9H720 699 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 SLC40A1Q9NP59 571 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 INPP5EQ9NRR6 644 aa2.38□□□□□ -2.03
CD46-216ENST00000490278 CSDC2Q9Y534 153 aaKnown RBP2.38□□□□□ -2.03
CD46-216ENST00000490278 ZNFX1Q9P2E3 1918 aaKnown RBP2.38□□□□□ -2.03
CD46-216ENST00000490278 MN1Q10571 1320 aaPredicted RBP2.38□□□□□ -2.03
CD46-216ENST00000490278 ARID1AO14497 2285 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 IGKV2-28A0A075B6P5 120 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 IGHV3-66A0A0C4DH42 116 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 XKRY2A2RUG3 117 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 INS-IGF2F8WCM5 200 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 H0YHG0 523 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 MRPS12O15235 138 aaKnown RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 EEDO75530 441 aaKnown RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 SNX4O95219 450 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 UTS2O95399 124 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 IGKV2D-28P01615 120 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 CRYGBP07316 175 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 FOLR1P15328 257 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ZNF823P16415 610 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ZNF43P17038 809 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 PBLDP30039 288 aaPredicted RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 CCNHP51946 323 aaPredicted RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 LINC00315P59091 139 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ACTA2P62736 377 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ACTG2P63267 376 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ACTC1P68032 377 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 TCP10Q12799 353 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 SLAQ13239 276 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 POU2AF1Q16633 256 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 UBE2SQ16763 222 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 NIPA1Q7RTP0 329 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 OAFQ86UD1 273 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 FAM86B1Q8N7N1 296 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 OR10G2Q8NGC3 310 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 FAM3DQ96BQ1 224 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 CYTL1Q9NRR1 136 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 ZNF629Q9UEG4 869 aaPredicted RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 ING4Q9UNL4 249 aa2.37□□□□□ -2.03
CD46-216ENST00000490278 MRPS18BQ9Y676 258 aaKnown RBP2.37□□□□□ -2.03
CD46-216ENST00000490278 CNTNAP1P78357 1384 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 HEATR9A2RTY3 570 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 FAM47DPA6NHR8 397 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 ZNF716A6NP11 495 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 UBXN8O00124 270 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 CDC7O00311 574 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 CIB2O75838 187 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 AIFM1O95831 613 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 CLIC3O95833 236 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 FABP3P05413 133 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 TLX1NBP0CAT3 122 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 ZNF735P0CB33 412 aa2.36□□□□□ -2.03
CD46-216ENST00000490278 TROVE2P10155 538 aaKnown RBP eCLIP2.36□□□□□ -2.03
CD46-216ENST00000490278 PRPS2P11908 318 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms