RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF26P17031 533 aaPredicted RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 TGM1P22735 817 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 CTSCP53634 463 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 RUNX2Q13950 521 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 EXOSC7Q15024 291 aaKnown RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM31Q5JXX7 168 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 ABHD17CQ6PCB6 329 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 SYS1Q8N2H4 156 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 LMNTD1Q8N9Z9 388 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 LGALS14Q8TCE9 139 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 CSF3RQ99062 836 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 VSX1Q9NZR4 365 aaPredicted RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 KCMF1Q9P0J7 381 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 MN1Q10571 1320 aaPredicted RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 PRAMEF25A6NGN4 478 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 ADAM12O43184 909 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 CSO75390 466 aaKnown RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 ARL16Q0P5N6 197 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 PAPD4Q6PIY7 484 aaKnown RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 C12orf76Q8N812 135 aaPredicted RBP8.16□□□□□ -1.1
LSAMP-205ENST00000490035 MORN4Q8NDC4 146 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 HRASLSQ9HDD0 168 aa8.16□□□□□ -1.1
LSAMP-205ENST00000490035 SLC5A2P31639 672 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM176BQ3YBM2 270 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 OR2A25A4D2G3 310 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 NXPH2O95156 264 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 CYB561P49447 251 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 NOVA1P51513 510 aaKnown RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 RPL27P61353 136 aaKnown RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ZXDBP98169 803 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 HABP2Q14520 560 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 DEFB133Q30KQ1 61 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 MED25Q71SY5 747 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 YIPF5Q969M3 257 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 TMIGD2Q96BF3 282 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ACKR4Q9NPB9 350 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 FAM183AA6NL82 134 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 FAM171A2A8MVW0 826 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 C1QBP02746 253 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 HPNP05981 417 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 PRSS56P0CW18 603 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 CCR5P51681 352 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF542PQ5EBM4 170 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 PLXDC2Q6UX71 529 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF620Q6ZNG0 422 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 GDF7Q7Z4P5 450 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 PRR22Q8IZ63 422 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 MAML2Q8IZL2 1156 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ARFGEF1Q9Y6D6 1849 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 GABRA2P47869 451 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 CLDN17P56750 224 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 STK11Q15831 433 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 FAM71E1Q6IPT2 247 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 USP51Q70EK9 711 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 OR10K1Q8NGX5 313 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 RTL8AQ9BWD3 113 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 LIN7CQ9NUP9 197 aaKnown RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 NSA2O95478 260 aaKnown RBP8.15□□□□□ -1.1
LSAMP-205ENST00000490035 FOLR1P15328 257 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 PFN3P60673 137 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 DNAJC5GQ8N7S2 189 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 SDSLQ96GA7 329 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 ARV1Q9H2C2 271 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 WASH6PQ9NQA3 447 aa8.15□□□□□ -1.1
LSAMP-205ENST00000490035 RPS10-NUDT3A0A1W2PQS6 291 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 ZBTB42B2RXF5 422 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 RPS10P46783 165 aaKnown RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SEMA3BQ13214 749 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 PLA1AQ53H76 456 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 HMGN2P46Q86SG4 172 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF573Q86YE8 665 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 LAX1Q8IWV1 398 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 NLGN4XQ8N0W4 816 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF485Q8NCK3 441 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 PDXPQ96GD0 296 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 PLEKHA2Q9HB19 425 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 EXO1Q9UQ84 846 aaKnown RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SNX11Q9Y5W9 270 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 PRSS21Q9Y6M0 314 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 A0A1B0GWA3 101 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 E5RGE8 158 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 F11P03951 625 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SCAND1P57086 179 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 TIPARPQ7Z3E1 657 aaKnown RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SEMA6DQ8NFY4 1073 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 HPSE2Q8WWQ2 592 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 DLL4Q9NR61 685 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 OSGIN1Q9UJX0 560 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 PPT2Q9UMR5 302 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 ATG2BQ96BY7 2078 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SEC16AO15027 2179 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 XRCC2O43543 280 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 SNRNP70P08621 437 aaKnown RBP8.15□□□□□ -1.11
LSAMP-205ENST00000490035 CSNK1G2P78368 415 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 RTL8BQ17RB0 113 aa8.15□□□□□ -1.11
LSAMP-205ENST00000490035 NRARPQ7Z6K4 114 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms