RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 C1QTNF6Q9BXI9 259 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 TMED7Q9Y3B3 224 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 LOC100509620A0A075B734 347 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 GABARAPH6UMI1 98 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 POU3F4P49335 361 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 HNRNPKP61978 463 aaKnown RBP eCLIP14.17□□□□□ -0.14
BRD9-208ENST00000489816 EEF1A1P5Q5VTE0 462 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 CREB3L2Q70SY1 520 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 NDUFAF7Q7L592 441 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 LRRTM1Q86UE6 522 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 GPR148Q8TDV2 347 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 OR1F2PQ96R84 312 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 GPX7Q96SL4 187 aaPredicted RBP14.17□□□□□ -0.14
BRD9-208ENST00000489816 MED11Q9P086 117 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 TMEM131Q92545 1883 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 CACNA1EQ15878 2313 aa14.17□□□□□ -0.14
BRD9-208ENST00000489816 IGHV1OR21-1A0A087WYE8 117 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 LMO7DNF2Z398 122 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 PYCARD-AS1I3L0S3 204 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 LIPCP11150 499 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 TSPAN5P62079 268 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 FOXK1P85037 733 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 CD276Q5ZPR3 534 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ADGRG3Q86Y34 549 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 LIX1LQ8IVB5 337 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SIX5Q8N196 739 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SLC38A9Q8NBW4 561 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 OR7G1Q8NGA0 311 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SLC2A4RGQ9NR83 387 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 MRPL22Q9NWU5 206 aaKnown RBP14.16□□□□□ -0.14
BRD9-208ENST00000489816 LOC101059948A0A1B0GTJ6 334 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 CPED1A4D0V7 1026 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 FRG2CA6NGY1 282 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 RGS11O94810 467 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 MPC2O95563 127 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 PER3P56645 1201 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SPOCK1Q08629 439 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 B3GNTL1Q67FW5 361 aaPredicted RBP14.16□□□□□ -0.14
BRD9-208ENST00000489816 FAM198BQ6UWH4 519 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SLC29A4Q7RTT9 530 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 C8orf44Q96CB5 159 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ADAM19Q9H013 955 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 GDF9O60383 454 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 SLC25A1P53007 311 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 IL10RAQ13651 578 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 OR7A5Q15622 319 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ELAVL1Q15717 326 aaKnown RBP14.16□□□□□ -0.14
BRD9-208ENST00000489816 COL28A1Q2UY09 1125 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ZBTB37Q5TC79 503 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 TEX261Q6UWH6 196 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ARSKQ6UWY0 536 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ZNF627Q7L945 461 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 BPHLQ86WA6 291 aaPredicted RBP14.16□□□□□ -0.14
BRD9-208ENST00000489816 OTOSQ8NHW6 89 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 HAVCR1Q96D42 359 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ZNF285Q96NJ3 590 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 ATG5Q9H1Y0 275 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 EMC9Q9Y3B6 208 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 U3KQ87 197 aa14.16□□□□□ -0.14
BRD9-208ENST00000489816 PRSS37A4D1T9 235 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 LILRA5A6NI73 299 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 BGLAPP02818 100 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 HSF2Q03933 536 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 C19orf57Q0VDD7 668 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 EIF2B1Q14232 305 aaKnown RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 C2orf76Q3KRA6 126 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 SLC25A45Q8N413 288 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 ZNF578Q96N58 590 aaPredicted RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 MICU1Q9BPX6 476 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 PTDSS2Q9BVG9 487 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 ZNF436Q9C0F3 470 aaPredicted RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 LAT2Q9GZY6 243 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 RANBP3Q9H6Z4 567 aaPredicted RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 MRPL39Q9NYK5 338 aaKnown RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 SUSD2Q9UGT4 822 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 MOKQ9UQ07 419 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 IGKV1D-43A0A0B4J1Z2 117 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 IGLV3-19P01714 112 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 SULT1A3P0DMM9 295 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 SULT1A4P0DMN0 295 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 C2orf68Q2NKX9 166 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 C1orf140Q5VVS0 124 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 MAMDC2Q7Z304 686 aaPredicted RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 TMPRSS9Q7Z410 1059 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 ELMOD2Q8IZ81 293 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 DAZLQ92904 295 aaKnown RBP14.15□□□□□ -0.14
BRD9-208ENST00000489816 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 C4orf45Q96LM5 186 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 SLX1AQ9BQ83 275 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 GINS4Q9BRT9 223 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 CHST6Q9GZX3 395 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 EMC7Q9NPA0 242 aa14.15□□□□□ -0.14
BRD9-208ENST00000489816 POM121CA8CG34 1229 aa14.14□□□□□ -0.15
BRD9-208ENST00000489816 TNRC18O15417 2968 aaPredicted RBP14.14□□□□□ -0.15
BRD9-208ENST00000489816 TIAF1O95411 115 aa14.14□□□□□ -0.15
BRD9-208ENST00000489816 DMWDQ09019 674 aa14.14□□□□□ -0.15
BRD9-208ENST00000489816 ZNF782Q6ZMW2 699 aaPredicted RBP14.14□□□□□ -0.15
BRD9-208ENST00000489816 JAGN1Q8N5M9 183 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms