RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 B3GNT2Q9NY97 397 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 CELSR1Q9NYQ6 3014 aa12.41□□□□□ -0.42
BRCA1-218ENST00000489037 TRBV4-1A0A0J9YWV2 114 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 NDUFB2O95178 105 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 SEMG1P04279 462 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 CD14P08571 375 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 CELA3BP08861 270 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 RRM2P31350 389 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 GIPRP48546 466 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 SNRPD2P62316 118 aaKnown RBP12.4□□□□□ -0.42
BRCA1-218ENST00000489037 ERVK-25P63136 954 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 GALK2Q01415 458 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 PLP2Q04941 152 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 C10orf128Q5T292 105 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 VHLLQ6RSH7 139 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 KRTAP1-3Q8IUG1 177 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 NUP37Q8NFH4 326 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 NSMAFQ92636 917 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 HDAC2Q92769 488 aaKnown RBP12.4□□□□□ -0.42
BRCA1-218ENST00000489037 FBXO17Q96EF6 278 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 C1orf198Q9H425 327 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 CCNB1IP1Q9NPC3 277 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 CA10Q9NS85 328 aa12.4□□□□□ -0.42
BRCA1-218ENST00000489037 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-218ENST00000489037 RTTNQ86VV8 2226 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 IQCMA0A1B0GVH7 501 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SH3PXD2BA1X283 911 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 UNC119BA6NIH7 251 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 FAM171A2A8MVW0 826 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 B9A039 149 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 CDC42EP2O14613 210 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 OR10H3O60404 316 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 KRT36O76013 467 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 PDE5AO76074 875 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SLC2A10O95528 541 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 CALCRP30988 508 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SERPINF1P36955 418 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 OMPP47874 163 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF133P52736 654 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-218ENST00000489037 DAG1Q14118 895 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 RAB39AQ14964 217 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SGCAQ16586 387 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 CLEC12BQ2HXU8 276 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 C11orf71Q6IPW1 123 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 LRRC18Q8N456 261 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 RSRC1Q96IZ7 334 aaKnown RBP12.39□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF570Q96NI8 536 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 TSPAN32Q96QS1 320 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 THTPAQ9BU02 230 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 MAGIXQ9H6Y5 334 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SEC61A2Q9H9S3 476 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 SIAEQ9HAT2 523 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 TAS2R1Q9NYW7 299 aa12.39□□□□□ -0.43
BRCA1-218ENST00000489037 H7C1Q1 480 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 GYG2O15488 501 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 AHCYL1O43865 530 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 PTP4A3O75365 173 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SERPINA5P05154 406 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 INHBBP09529 407 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 OR4A8P0C604 315 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF14P17017 642 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-218ENST00000489037 ATP6V1B2P21281 511 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 LIMS1P48059 325 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 NUDT6P53370 316 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
BRCA1-218ENST00000489037 MRPS34P82930 218 aaKnown RBP12.38□□□□□ -0.43
BRCA1-218ENST00000489037 HSF2Q03933 536 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SEC23BQ15437 767 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 IQCCQ4KMZ1 466 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 DNAL1Q4LDG9 190 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 FAM98BQ52LJ0 330 aaKnown RBP12.38□□□□□ -0.43
BRCA1-218ENST00000489037 GPR139Q6DWJ6 353 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SLC25A47Q6Q0C1 308 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 BIVMQ86UB2 503 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 LINC00471Q8N535 108 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 OR1J2Q8NGS2 313 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 ASB9Q96DX5 294 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF442Q9H7R0 627 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 NOX3Q9HBY0 568 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
BRCA1-218ENST00000489037 SLC22A23A1A5C7 686 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 H7C417 338 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 TNFRSF11BO00300 401 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms