RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 NABP1Q96AH0 204 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 RASD2Q96D21 266 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 PLA2G12AQ9BZM1 189 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 LIME1Q9H400 295 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 MOV10Q9HCE1 1003 aaKnown RBP16.26■□□□□ 0.19
PTCD3-217ENST00000488801 VSX1Q9NZR4 365 aaPredicted RBP16.26■□□□□ 0.19
PTCD3-217ENST00000488801 MGAT4BQ9UQ53 548 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 POFUT2Q9Y2G5 429 aa16.26■□□□□ 0.19
PTCD3-217ENST00000488801 TEX13CA0A0J9YWL9 993 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 SLC22A23A1A5C7 686 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 PRSS37A4D1T9 235 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 BHLHE40O14503 412 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 IMPA2O14732 288 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 TIPRLO75663 272 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 CD3EP07766 207 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 ZNF83P51522 516 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 UBE2NP61088 152 aaKnown RBP16.25■□□□□ 0.19
PTCD3-217ENST00000488801 TUBA1BP68363 451 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 TUBA4AP68366 448 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
PTCD3-217ENST00000488801 SPOCK1Q08629 439 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 CD47Q08722 323 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 KLHL17Q6TDP4 642 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 PTCHD4Q6ZW05 846 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 TUBA1AQ71U36 451 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 ADCK1Q86TW2 530 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 OR8D4Q8NGM9 314 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 GIPC3Q8TF64 312 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 SAMD8Q96LT4 415 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 SNX18Q96RF0 628 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 NIPSNAP1Q9BPW8 284 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 EGLN3Q9H6Z9 239 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 GRHPRQ9UBQ7 328 aa16.25■□□□□ 0.19
PTCD3-217ENST00000488801 IGHV1-18A0A0C4DH31 117 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 H7C1C5 153 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 DEAF1O75398 565 aaPredicted RBP16.24■□□□□ 0.19
PTCD3-217ENST00000488801 CIB2O75838 187 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 PPP1R3DO95685 299 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 CBR1P16152 277 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 GSTM3P21266 225 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 RPS6KA3P51812 740 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 LCN6P62502 163 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 ATP6AP1Q15904 470 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 FBXW10Q5XX13 1052 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 TMEM108Q6UXF1 575 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 CDH24Q86UP0 819 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 MYPOPQ86VE0 399 aaPredicted RBP16.24■□□□□ 0.19
PTCD3-217ENST00000488801 SLC22A24Q8N4F4 322 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 KBTBD8Q8NFY9 601 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 NINJ1Q92982 152 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 NRBF2Q96F24 287 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 SLC38A2Q96QD8 506 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 FEVQ99581 238 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 ST6GALNAC2Q9UJ37 374 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 IER3IP1Q9Y5U9 82 aa16.24■□□□□ 0.19
PTCD3-217ENST00000488801 M0R1B8 84 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 ABCD4O14678 606 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 ARHGEF9O43307 516 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 IDH3BO43837 385 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 MGRN1O60291 552 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 ATE1O95260 518 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 ZNF84P51523 738 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 ALKBH2Q6NS38 261 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 SHQ1Q6PI26 577 aaKnown RBP16.23■□□□□ 0.19
PTCD3-217ENST00000488801 MDP1Q86V88 176 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 SKA3Q8IX90 412 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 HS3ST5Q8IZT8 346 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 FGFBP3Q8TAT2 258 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 DENND2DQ9H6A0 471 aaPredicted RBP16.23■□□□□ 0.19
PTCD3-217ENST00000488801 SEC61A2Q9H9S3 476 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 REV1Q9UBZ9 1251 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 AP4S1Q9Y587 144 aa16.23■□□□□ 0.19
PTCD3-217ENST00000488801 XKRYO14609 159 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 HS3ST1O14792 307 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ENTPD5O75356 428 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 HLA-HP01893 362 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 CELA3BP08861 270 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 CECR9P0C854 216 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 OR8G3PP0DMU2 310 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 CTLA4P16410 223 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ZNF14P17017 642 aaPredicted RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ARR3P36575 388 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 CDKN2AP42771 156 aaKnown RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 COX10Q12887 443 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ZNF672Q499Z4 452 aaPredicted RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 C20orf204Q6ZNR8 217 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 LNX2Q8N448 690 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 NANOS1Q8WY41 292 aaKnown RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 HTRA1Q92743 480 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 GTPBP3Q969Y2 492 aaKnown RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 RADILQ96JH8 1075 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ERMAPQ96PL5 475 aaPredicted RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 RBP7Q96R05 134 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 DDOQ99489 341 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 C1QTNF6Q9BXI9 259 aa16.22■□□□□ 0.19
PTCD3-217ENST00000488801 PDP1Q9P0J1 537 aaPredicted RBP16.22■□□□□ 0.19
PTCD3-217ENST00000488801 ITPR3Q14573 2671 aa16.21■□□□□ 0.19
PTCD3-217ENST00000488801 SOCS2O14508 198 aa16.21■□□□□ 0.19
PTCD3-217ENST00000488801 GNGT2O14610 69 aa16.21■□□□□ 0.19
PTCD3-217ENST00000488801 UBL3O95164 117 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms