RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ZFYVE9O95405 1425 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NUP155O75694 1391 aa2.54□□□□□ -2
RBM28-207ENST00000488249 MTUS2Q5JR59 1369 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RAB3GAP2Q9H2M9 1393 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NEDD4P46934 1319 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NPIPA5A0A0B4J1W7 369 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TRBV7-9A0A0J9YWB2 115 aa2.54□□□□□ -2
RBM28-207ENST00000488249 hCG_38984A0A1B0GV85 526 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GLTPD2A6NH11 291 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NKX6-3A6NJ46 265 aa2.54□□□□□ -2
RBM28-207ENST00000488249 SHISA7A6NL88 538 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CENPXA8MT69 81 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NPIPA5E9PKD4 350 aa2.54□□□□□ -2
RBM28-207ENST00000488249 H3BMH7 237 aa2.54□□□□□ -2
RBM28-207ENST00000488249 LAD1O00515 517 aa2.54□□□□□ -2
RBM28-207ENST00000488249 IMPA2O14732 288 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TNFSF11O14788 317 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CASKO14936 926 aa2.54□□□□□ -2
RBM28-207ENST00000488249 PRKAB2O43741 272 aa2.54□□□□□ -2
RBM28-207ENST00000488249 HSBP1O75506 76 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TSPAN13O95857 204 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TCRBP04435 133 aa2.54□□□□□ -2
RBM28-207ENST00000488249 MELTFP08582 738 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TFPTP0C1Z6 253 aa2.54□□□□□ -2
RBM28-207ENST00000488249 AOC1P19801 751 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ME2P23368 584 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GLRA1P23415 457 aa2.54□□□□□ -2
RBM28-207ENST00000488249 IVDP26440 423 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GCKP35557 465 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RBM34P42696 430 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 SLC1A1P43005 524 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GPR1P46091 355 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OMPP47874 163 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CSNK1A1P48729 337 aa2.54□□□□□ -2
RBM28-207ENST00000488249 IDH2P48735 452 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 PRLHRP49683 370 aa2.54□□□□□ -2
RBM28-207ENST00000488249 HLCSP50747 726 aa2.54□□□□□ -2
RBM28-207ENST00000488249 P2RY4P51582 365 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RIDAP52758 137 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 PKNOX1P55347 436 aa2.54□□□□□ -2
RBM28-207ENST00000488249 UBE2MP61081 183 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 ERVK-16P61578 105 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RPS15AP62244 130 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 MRPS6P82932 125 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 SRYQ05066 204 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CKAP4Q07065 602 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 PDIA2Q13087 525 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 AQP6Q13520 282 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TPBGQ13641 420 aa2.54□□□□□ -2
RBM28-207ENST00000488249 VGLL4Q14135 290 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TFDP1Q14186 410 aa2.54□□□□□ -2
RBM28-207ENST00000488249 DPYSL3Q14195 570 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GPNMBQ14956 572 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ARL6IP1Q15041 203 aa2.54□□□□□ -2
RBM28-207ENST00000488249 PON3Q15166 354 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ZNHIT3Q15649 155 aaPredicted RBP2.54□□□□□ -2
RBM28-207ENST00000488249 SLC22A6Q4U2R8 563 aa2.54□□□□□ -2
RBM28-207ENST00000488249 SOHLH1Q5JUK2 328 aa2.54□□□□□ -2
RBM28-207ENST00000488249 BRMS1LQ5PSV4 323 aa2.54□□□□□ -2
RBM28-207ENST00000488249 C1orf220Q5T0J3 134 aa2.54□□□□□ -2
RBM28-207ENST00000488249 C9orf135Q5VTT2 229 aa2.54□□□□□ -2
RBM28-207ENST00000488249 MEDAGQ5VYS4 303 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ANKRD26P1Q6NSI1 321 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ZNF530Q6P9A1 599 aaPredicted RBP2.54□□□□□ -2
RBM28-207ENST00000488249 DHRS11Q6UWP2 260 aa2.54□□□□□ -2
RBM28-207ENST00000488249 LRRN1Q6UXK5 716 aa2.54□□□□□ -2
RBM28-207ENST00000488249 DPY19L2P2Q6ZN68 376 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NUFIP2Q7Z417 695 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 P4HA3Q7Z4N8 544 aa2.54□□□□□ -2
RBM28-207ENST00000488249 UNC93AQ86WB7 457 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CDC20BQ86Y33 519 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TMEM25Q86YD3 366 aa2.54□□□□□ -2
RBM28-207ENST00000488249 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ZNF444Q8N0Y2 327 aaPredicted RBP2.54□□□□□ -2
RBM28-207ENST00000488249 ABHD12Q8N2K0 398 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NATD1Q8N6N6 113 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TMEM99Q8N816 258 aa2.54□□□□□ -2
RBM28-207ENST00000488249 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.54□□□□□ -2
RBM28-207ENST00000488249 ZNF738Q8NE65 137 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR2L5Q8NG80 312 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR4F6Q8NGB9 312 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR52B6Q8NGF0 335 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR2D3Q8NGH3 330 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR56A4Q8NGH8 313 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR52N1Q8NH53 320 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR2V1Q8NHB1 315 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RPLP0P6Q8NHW5 317 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NPRL2Q8WTW4 380 aa2.54□□□□□ -2
RBM28-207ENST00000488249 BAALCQ8WXS3 180 aa2.54□□□□□ -2
RBM28-207ENST00000488249 BADQ92934 168 aa2.54□□□□□ -2
RBM28-207ENST00000488249 APH1AQ96BI3 265 aa2.54□□□□□ -2
RBM28-207ENST00000488249 SGTBQ96EQ0 304 aa2.54□□□□□ -2
RBM28-207ENST00000488249 WFIKKN1Q96NZ8 548 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TEAD3Q99594 435 aa2.54□□□□□ -2
RBM28-207ENST00000488249 IL12RB2Q99665 862 aa2.54□□□□□ -2
RBM28-207ENST00000488249 EBNA1BP2Q99848 306 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 NAA50Q9GZZ1 169 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 CHRNA10Q9GZZ6 450 aa2.54□□□□□ -2
RBM28-207ENST00000488249 PORCNQ9H237 461 aa2.54□□□□□ -2
RBM28-207ENST00000488249 OR51B5Q9H339 312 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms