RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 USP47Q96K76 1375 aa2.4□□□□□ -2.02
HMGB1P36-201ENST00000487709 COL16A1Q07092 1604 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A0G2JLM5 398 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A1B0GVI7 797 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A1W2PPV9 198 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 LRRIQ3A6PVS8 624 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 INS-IGF2F8WCM5 200 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 SNAI2O43623 268 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 FGGP02679 453 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 UQCRFS1P1P0C7P4 283 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF32P17041 273 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 F2RP25116 425 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 NAMPTP43490 491 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ADARB1P78563 741 aaKnown RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC7A9P82251 487 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ERCC8Q13216 396 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 PPIL2Q13356 520 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 RABL6Q3YEC7 729 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 HES5Q5TA89 166 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAET1LQ5VY80 246 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM71E1Q6IPT2 247 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF493Q6ZR52 646 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDR2LQ86X02 465 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC22A9Q8IVM8 553 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDH26Q8IXH8 852 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 SAXO1Q8IYX7 474 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR10G4Q8NGN3 311 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR4S2Q8NH73 311 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM110BQ8TC76 370 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 GIMAP1Q8WWP7 306 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM3DQ96BQ1 224 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 CCDC77Q9BR77 488 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 TPK1Q9H3S4 243 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 RPF2Q9H7B2 306 aaKnown RBP2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ISYNA1Q9NPH2 558 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 TBX21Q9UL17 535 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIAA1257Q9ULG3 409 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 ING4Q9UNL4 249 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 PSG11Q9UQ72 335 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 PIKFYVEQ9Y2I7 2098 aa2.4□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDC42BPBQ9Y5S2 1711 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 MEGF6O75095 1541 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A096LNJ9 63 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGHV3-66A0A0C4DH42 116 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 XKRY2A2RUG3 117 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 GOLGA8OA6NCC3 632 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 ERVV-1B6SEH8 477 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 C11orf94C9JXX5 98 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 GOLGA8NF8WBI6 632 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 LSM1O15116 133 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 KRT14P02533 472 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 FABP3P05413 133 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 MAGP20916 626 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 WARSP23381 471 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 RPS9P46781 194 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 RFX3P48380 749 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 CCNHP51946 323 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 GPX6P59796 221 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 ARG2P78540 354 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 CCDC183Q5T5S1 534 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 ARMC12Q5T9G4 340 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 C9orf135Q5VTT2 229 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 HDDC2Q7Z4H3 204 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 H1FOOQ8IZA3 346 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR2L3Q8NG85 312 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR10R2Q8NGX6 335 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 NUP58Q9BVL2 599 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 MRPL37Q9BZE1 423 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 PLA2G2FQ9BZM2 168 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 PATZ1Q9HBE1 687 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 CYTL1Q9NRR1 136 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 NMRK1Q9NWW6 199 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 UXTQ9UBK9 157 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 TRMT112Q9UI30 125 aaKnown RBP2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 TMED5Q9Y3A6 229 aa2.39□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIR2DL5BA0A0G2JN68 375 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIR2DL5BA0A0G2JPC4 375 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A1W2PP18 115 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CTAGE15A4D2H0 777 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF726A6NNF4 738 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 HIDE1A8MVS5 230 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 RSPH10B2B2RC85 870 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 F6UB75 175 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 B4GALT5O43286 388 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 AIREO43918 545 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDC40O60508 579 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CLPXO76031 633 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 AIFM1O95831 613 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 C6orf47O95873 294 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 AGTP01019 485 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CST1P01037 141 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 HLA-DPB1P04440 258 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CRYGBP07316 175 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 RSPH10BP0C881 870 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CCNB1P14635 433 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 PEX19P40855 299 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms