RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 LRR1Q96L50 414 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 ADAD1Q96M93 576 aaKnown RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 ZNF75AQ96N20 296 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 SLC38A2Q96QD8 506 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 TNFRSF13CQ96RJ3 184 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 SEPHS2Q99611 448 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 FOXB1Q99853 325 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 FUZQ9BT04 418 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 TRAF4Q9BUZ4 470 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 MRPL13Q9BYD1 178 aaKnown RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 OBP2BQ9NPH6 170 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 DLL4Q9NR61 685 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 ZNF701Q9NV72 531 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 CRNNQ9UBG3 495 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 POU2F3Q9UKI9 436 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 SAMD4AQ9UPU9 718 aaKnown RBP6.22□□□□□ -1.41
UBE4B-209ENST00000487244 ATP23Q9Y6H3 246 aa6.22□□□□□ -1.41
UBE4B-209ENST00000487244 A0A1W2PRG6 482 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 A0A1W2PRQ8 180 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TCRBV5S2A0A599 114 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TRIM64A6NGJ6 449 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TRIM64BA6NI03 449 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 EFCAB9A8MZ26 197 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 H7C1C5 153 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TRMUO75648 421 aaKnown RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SLC2A10O95528 541 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 BCL10O95999 233 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 IGKV3-15P01624 115 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 IGHV4-39P01824 125 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 IGHG1P01857 330 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 QDPRP09417 244 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CD79AP11912 226 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CD99P14209 185 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 PAX1P15863 534 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CBR1P16152 277 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ACADSP16219 412 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 RHCEP18577 417 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 RAB6AP20340 208 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CDAP32320 146 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CAPZA2P47755 286 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 LIMS1P48059 325 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ATP5J2P56134 94 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CLRN1P58418 232 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 FXYD6P3P58550 94 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 LCN6P62502 163 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 MS4A2Q01362 244 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SPIBQ01892 262 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 NAAAQ02083 359 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 HGFACQ04756 655 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 DBPQ10586 325 aaPredicted RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 DGCR6Q14129 220 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 HIST3H3Q16695 136 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ALG10Q5BKT4 473 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 C11orf71Q6IPW1 123 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF627Q7L945 461 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SSX8Q7RTT4 187 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 YTHDF3Q7Z739 585 aaKnown RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 OAFQ86UD1 273 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 DTX2Q86UW9 622 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CYP4Z1Q86W10 505 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ZDHHC13Q8IUH4 622 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SKA3Q8IX90 412 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 OR4K5Q8NGD3 323 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF519Q8TB69 540 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 BCAS4Q8TDM0 211 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 MCHR2Q969V1 340 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CCDC124Q96CT7 223 aaKnown RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 NMD3Q96D46 503 aaKnown RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 PYURFQ96I23 114 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 Q96MF0 132 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 NSMCE2Q96MF7 247 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TSPAN32Q96QS1 320 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 GPA33Q99795 319 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SMR3AQ99954 134 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SH3GL3Q99963 347 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 DHRS9Q9BPW9 319 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TXNIPQ9H3M7 391 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 CXorf56Q9H5V9 222 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 B3GAT2Q9NPZ5 323 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 TMEM38BQ9NVV0 291 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 NDE1Q9NXR1 346 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 B3GNT2Q9NY97 397 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 IL20RAQ9UHF4 553 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 MGAT4BQ9UQ53 548 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 POFUT2Q9Y2G5 429 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 ADAM18Q9Y3Q7 739 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 UGT2A1Q9Y4X1 527 aa6.21□□□□□ -1.42
UBE4B-209ENST00000487244 SONP18583 2426 aaKnown RBP6.21□□□□□ -1.42
UBE4B-209ENST00000487244 FN1P02751 2386 aaKnown RBP6.2□□□□□ -1.42
UBE4B-209ENST00000487244 IGHV2OR16-5A0A0B4J2B6 119 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.2□□□□□ -1.42
UBE4B-209ENST00000487244 SH3PXD2BA1X283 911 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 NPIPB13A6NJU9 1138 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 NPIPB4C9JG80 1138 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 IMPA2O14732 288 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 DHHO43323 396 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 GMNNO75496 209 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 UBOX5O94941 541 aa6.2□□□□□ -1.42
UBE4B-209ENST00000487244 IGHMP01871 453 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms