RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ACOT11Q8WXI4 607 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 HDAC2Q92769 488 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 FAM162AQ96A26 154 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 MRPL24Q96A35 216 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 NMD3Q96D46 503 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 FOXN4Q96NZ1 517 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 PIMREGQ9BSJ6 248 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 MRPL37Q9BZE1 423 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 FAM107BQ9H098 131 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 SMURF2Q9HAU4 748 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF346Q9UL40 294 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 ANK3Q12955 4377 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 A0A087WUU8 490 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 GMNCA6NCL1 334 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 A8MV72 311 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 PRSS23O95084 383 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 IGFBP1P08833 259 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 ADRA2AP08913 450 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 SAGP10523 405 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 NR2C1P13056 603 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 NCK1P16333 377 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 DRD4P21917 467 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 NR4A2P43354 598 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 RPS23P62266 143 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 CARTPTQ16568 116 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 MSMPQ1L6U9 139 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 CPLX4Q7Z7G2 160 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 LRRC75AQ8NAA5 344 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC30A7Q8NEW0 376 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 OR51A7Q8NH64 312 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 KCNK17Q96T54 332 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 NSRP1Q9H0G5 558 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 SIAEQ9HAT2 523 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 DYNLRB1Q9NP97 96 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC7A8Q9UHI5 535 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 RPS6KA6Q9UK32 745 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 ARFGEF3Q5TH69 2177 aa15.86■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC22A23A1A5C7 686 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 EFCAB9A8MZ26 197 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 SYNGR3O43761 229 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 PTHP01270 115 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 IGHMP01871 453 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC9A3P48764 834 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 CTXN1P60606 82 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 RPL27P61353 136 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 MRPS34P82930 218 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 FHL1Q13642 323 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 CYB5R2Q6BCY4 276 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 GLYATQ6IB77 296 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 TBPL2Q6SJ96 375 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF730Q6ZMV8 503 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 MBOAT2Q6ZWT7 520 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 TSEN54Q7Z6J9 526 aaKnown RBP15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 OAFQ86UD1 273 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 CYP4Z1Q86W10 505 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF540Q8NDQ6 660 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 RBP7Q96R05 134 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ALG12Q9BV10 488 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 KCNN2Q9H2S1 579 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 C1orf198Q9H425 327 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ANKRD19PQ9H560 264 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 SPAG4Q9NPE6 437 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ADAM21Q9UKJ8 722 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ENPP4Q9Y6X5 453 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 CR1P17927 2039 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 ABCA2Q9BZC7 2435 aa15.85■□□□□ 0.13
PRPF40A-209ENST00000486100 TRAV27A0A087WT01 109 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 IGKV1D-43A0A0B4J1Z2 117 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC2A10O95528 541 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 STAMBPO95630 424 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 MMP7P09237 267 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 DAOP14920 347 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 PLP2Q04941 152 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 CD47Q08722 323 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 TOP3AQ13472 1001 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 GGTLC2Q14390 218 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 THEM4Q5T1C6 240 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 C6orf52Q5T4I8 152 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC25A47Q6Q0C1 308 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 TMPRSS11FQ6ZWK6 438 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 RRM2BQ7LG56 351 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 MEX3DQ86XN8 651 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 HIPK1Q86Z02 1210 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 LRRC18Q8N456 261 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 RBM15BQ8NDT2 890 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 OR1J2Q8NGS2 313 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 FNDC8Q8TC99 324 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 MS4A5Q9H3V2 200 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 NMNAT1Q9HAN9 279 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 ADA2Q9NZK5 511 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 REV1Q9UBZ9 1251 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 EGFL7Q9UHF1 273 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 UGT2A1Q9Y4X1 527 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 ABCA1O95477 2261 aa15.84■□□□□ 0.13
PRPF40A-209ENST00000486100 IQCMA0A1B0GVH7 501 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 KIAA1324LA8MWY0 1029 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 IGHV4-31P0DP07 118 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 CCL2P13500 99 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 CDAP32320 146 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 FMODQ06828 376 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms