RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC29A1Q99808 456 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 FOXB1Q99853 325 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 OR10A4Q9H209 315 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 SYT4Q9H2B2 425 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 VSX1Q9NZR4 365 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 NDRG3Q9UGV2 375 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 UGT2A1Q9Y4X1 527 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 DCHS2Q6V1P9 2916 aa13.57□□□□□ -0.24
RPUSD3-217ENST00000485705 PLCE1Q9P212 2302 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 B4GALT1P15291 398 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CTLA4P16410 223 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 IGFBP5P24593 272 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CDAP32320 146 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 POLR2IP36954 125 aaKnown RBP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 GIPRP48546 466 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CRISP1P54107 249 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TUBA1BP68363 451 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TUBA4AP68366 448 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CDK5Q00535 292 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 DAG1Q14118 895 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 C10orf128Q5T292 105 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF787Q6DD87 383 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 OR7E24Q6IFN5 339 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 ANKRD16Q6P6B7 361 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 KLHL24Q6TFL4 600 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TUBA1AQ71U36 451 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 ADCK1Q86TW2 530 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 JAZF1Q86VZ6 243 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 LURAP1LQ8IV03 231 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CYB561A3Q8NBI2 242 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 NPEPL1Q8NDH3 523 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 DACH2Q96NX9 599 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 FOXN4Q96NZ1 517 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TSSK2Q96PF2 358 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 DDOQ99489 341 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 FN3KQ9H479 309 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC17A5Q9NRA2 495 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 TMEM38BQ9NVV0 291 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 NKX1-2Q9UD57 310 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 BAIAP2Q9UQB8 552 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC25A15Q9Y619 301 aa13.56□□□□□ -0.24
RPUSD3-217ENST00000485705 CELSR2Q9HCU4 2923 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF503-AS2A6NEH8 195 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 DCTN6O00399 190 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 ALPLP05186 524 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 EPXP11678 715 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 PPP3CBP16298 524 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 GRK5P34947 590 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 PEX19P40855 299 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC27A4Q6P1M0 643 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 SEZ6L2Q6UXD5 910 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF627Q7L945 461 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 FAM222BQ8WU58 562 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 HSD17B8Q92506 261 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 BOD1Q96IK1 185 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 NUAK2Q9H093 628 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 RERGLQ9H628 205 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
RPUSD3-217ENST00000485705 SIAH2O43255 324 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 AHCYL1O43865 530 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC16A7O60669 478 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 GPANK1O95872 356 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 RENP00797 406 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF84P51523 738 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ALDH3A2P51648 485 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ESRRGP62508 458 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 CRMP1Q14194 572 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 PPA1Q15181 289 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 PTGES3Q15185 160 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 TRIP10Q15642 601 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 OTPQ5XKR4 325 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SKA3Q8IX90 412 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF295-AS1Q8N0V1 137 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 OR6V1Q8N148 313 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 C17orf78Q8N4C9 275 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC37A3Q8NCC5 494 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 FGFBP3Q8TAT2 258 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 EME1Q96AY2 570 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 RIBC2Q9H4K1 309 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 SRA1Q9HD15 236 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 RPRD1BQ9NQG5 326 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-217ENST00000485705 ZNF224Q9NZL3 707 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms