RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SLC36A2Q495M3 483 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 AVPI1Q5T686 147 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 THSD4Q6ZMP0 1018 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 DEF8Q6ZN54 512 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 SLC30A8Q8IWU4 369 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 LRRC18Q8N456 261 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 SYT14Q8NB59 555 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 ICA1LQ8NDH6 482 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 GTF3AQ92664 365 aaKnown RBP16.43■□□□□ 0.22
COL27A1-205ENST00000485397 MRPL13Q9BYD1 178 aaKnown RBP16.43■□□□□ 0.22
COL27A1-205ENST00000485397 TRIM33Q9UPN9 1127 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 TRMUO75648 421 aaKnown RBP16.42■□□□□ 0.22
COL27A1-205ENST00000485397 FUT1P19526 365 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 TNFRSF1BP20333 461 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 UGT2B15P54855 530 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 UCP2P55851 309 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 MVKQ03426 396 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 TBC1D28Q2M2D7 210 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 VMACQ2NL98 169 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 TMEM154Q6P9G4 183 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 DPPA2Q7Z7J5 298 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 RBM15BQ8NDT2 890 aaKnown RBP16.42■□□□□ 0.22
COL27A1-205ENST00000485397 NOXO1Q8NFA2 376 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 OR1J2Q8NGS2 313 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 OR51F2Q8NH61 342 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 PFN4Q8NHR9 129 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF519Q8TB69 540 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 ASB10Q8WXI3 467 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 C11orf40Q8WZ69 217 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 C1orf198Q9H425 327 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 NANOGQ9H9S0 305 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 GPR160Q9UJ42 338 aa16.42■□□□□ 0.22
COL27A1-205ENST00000485397 IQCMA0A1B0GVH7 501 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 A0A1W2PRG6 482 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 MCIDASD6RGH6 385 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 RGS9O75916 674 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SNAP29O95721 258 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 MMP7P09237 267 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 AQP2P41181 271 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 RAD52P43351 418 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF84P51523 738 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 GLO1Q04760 184 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 PLP2Q04941 152 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 NRN1LQ496H8 165 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 INTS11Q5TA45 600 aaKnown RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 FAHD2BQ6P2I3 314 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 C12orf54Q6X4T0 127 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 CCDC80Q76M96 950 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 CPEB3Q8NE35 698 aaKnown RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SEMA6DQ8NFY4 1073 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 TSPEARQ8WU66 669 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SNX33Q8WV41 574 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 STON2Q8WXE9 905 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 FAHD2AQ96GK7 314 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SEPHS2Q99611 448 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 INTS9Q9NV88 658 aaKnown RBP16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SLCO1C1Q9NYB5 712 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SH3GLB1Q9Y371 365 aa16.41■□□□□ 0.22
COL27A1-205ENST00000485397 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-205ENST00000485397 OR7A10O76100 309 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 SLC2A10O95528 541 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 PTHP01270 115 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 MT-ND1P03886 318 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 ACADSP16219 412 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 CDAP32320 146 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 HSF2Q03933 536 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 PCGF3Q3KNV8 242 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 SHQ1Q6PI26 577 aaKnown RBP16.4■□□□□ 0.22
COL27A1-205ENST00000485397 C1orf229Q6ZS94 237 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-205ENST00000485397 MOSPD2Q8NHP6 518 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 TMEM255BQ8WV15 326 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 SGTBQ96EQ0 304 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 BCL2L14Q9BZR8 327 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 LRMDAQ9H2I8 198 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF665Q9H7R5 613 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 INIPQ9NRY2 104 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 C20orf141Q9NUB4 165 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 NKIRAS2Q9NYR9 191 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 CACNG2Q9Y698 323 aa16.4■□□□□ 0.22
COL27A1-205ENST00000485397 A0A0A6YYJ9 748 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 IGKV1D-43A0A0B4J1Z2 117 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 TRAV20A0A0B4J274 112 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 FBP2O00757 339 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 AVPP01185 164 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 CCNOP22674 350 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 APLNRP35414 380 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 CRYBB2P43320 205 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF133P52736 654 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-205ENST00000485397 TAS2R41P59536 307 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 TSTQ16762 297 aaKnown RBP16.39■□□□□ 0.21
COL27A1-205ENST00000485397 RABL3Q5HYI8 236 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 PABPC1L2AQ5JQF8 200 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 C10orf128Q5T292 105 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 ARMC4Q5T2S8 1044 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 NANOGP8Q6NSW7 305 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 USP51Q70EK9 711 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 OR1J1Q8NGS3 322 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 RASSF5Q8WWW0 418 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 MAGEB18Q96M61 343 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms