RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 ADAP2Q9NPF8 381 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 NUDT4Q9NZJ9 180 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ADAM29Q9UKF5 820 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SH2B3Q9UQQ2 575 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 DSPP15924 2871 aaKnown RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 CFAP46Q8IYW2 2715 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 A0A087X1B8 175 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 A0A1B0GUS0 222 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SAGE2PA6NJ88 616 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 IDSB3KWA1 339 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 MS4A18H0YCH9 400 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 H3BN98 237 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 H3BQF6 201 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 VCYO14598 125 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RCBTB2O95199 551 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 TBX6O95947 436 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 F10P00742 488 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HIST1H2ABP04908 130 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HOXD4P09016 255 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HIST1H2ADP20671 130 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 DTYMKP23919 212 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 STX2P32856 288 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 IFNA8P32881 189 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RAB38P57729 211 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 VSX2P58304 361 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 MVKQ03426 396 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 CHRNB3Q05901 458 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HNF4GQ14541 408 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 MEP1AQ16819 746 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RNF151Q2KHN1 245 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SLX4IPQ5VYV7 408 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 OR4F3Q6IEY1 312 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 DEF8Q6ZN54 512 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 TTLL10Q6ZVT0 673 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HIST3H2AQ7L7L0 130 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF837Q96EG3 531 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 MS4A14Q96JA4 679 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 AMDHD1Q96NU7 426 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 IL17FQ96PD4 163 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 AIF1LQ9BQI0 150 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 EFCAB11Q9BUY7 163 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 VN1R1Q9GZP7 353 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RANBP3Q9H6Z4 567 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 C19orf12Q9NSK7 152 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GID8Q9NWU2 228 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 PLEK2Q9NYT0 353 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 DHCR7Q9UBM7 475 aaKnown RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ACOT9Q9Y305 439 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 KIAA1549Q9HCM3 1950 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 OR5H15A6NDH6 313 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 RNH1P13489 461 aaKnown RBP4.7□□□□□ -1.66
CCDC39-205ENST00000485055 CD1DP15813 335 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 MAS1LP35410 378 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 ELK3P41970 407 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 MAGEA2P43356 314 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 RPL21P46778 160 aaKnown RBP4.7□□□□□ -1.66
CCDC39-205ENST00000485055 DGKQP52824 942 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 CRADDP78560 199 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 RGS1Q08116 209 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 PRAMEF17Q5VTA0 474 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 AGAP6Q5VW22 663 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 LIPJQ5W064 366 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM225Q6GV28 225 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 FAM166AQ6J272 317 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 TMPRSS11BQ86T26 416 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 DMRTC2Q8IXT2 367 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-205ENST00000485055 LINC00518Q8N0U6 118 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 EID3Q8N140 333 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 SLC5A8Q8N695 610 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 OR5M8Q8NGP6 311 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 OR52N1Q8NH53 320 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 OR51Q1Q8NH59 317 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 OR10J5Q8NHC4 309 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 ASB5Q8WWX0 329 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 HGDQ93099 445 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 FMO2Q99518 471 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 NRTNQ99748 197 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 AICDAQ9GZX7 198 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 ANKHQ9HCJ1 492 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 FBXO6Q9NRD1 293 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-205ENST00000485055 STEAP1Q9UHE8 339 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 TAC3Q9UHF0 121 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 EMCNQ9ULC0 261 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 MED13Q9UHV7 2174 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 SHISA8B8ZZ34 492 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 TAPBPO15533 448 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 XRCC2O43543 280 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 IGHG3P01860 377 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 GPIP06744 558 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 CSN3P07498 182 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 HIST1H2AGP0C0S8 130 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-205ENST00000485055 SLC35G6P0C7Q6 338 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 BMP7P18075 431 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 CA7P43166 264 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 KIR3DL1P43629 444 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 HLCSP50747 726 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 P2RY4P51582 365 aa4.7□□□□□ -1.66
CCDC39-205ENST00000485055 STXBP1P61764 594 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms