RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 NPR2P20594 1047 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 ARR3P36575 388 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 ERFP50548 548 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 IST1P53990 364 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 MESTQ5EB52 335 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 SKA3Q8IX90 412 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 IL17RDQ8NFM7 739 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 LILRB1Q8NHL6 650 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 NANOS1Q8WY41 292 aaKnown RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 NINJ1Q92982 152 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 ERMAPQ96PL5 475 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 C1QTNF6Q9BXI9 259 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 VSX1Q9NZR4 365 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 UGT2A1Q9Y4X1 527 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 HRNRQ86YZ3 2850 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 PDZD2O15018 2839 aa15.78■□□□□ 0.12
CNKSR1-208ENST00000484874 IGKV1D-43A0A0B4J1Z2 117 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 TEX13CA0A0J9YWL9 993 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 M0R1B8 84 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 E2F6O75461 281 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 TIPRLO75663 272 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 FCGR1AP12314 374 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 ANXA8P13928 327 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 B4GALT1P15291 398 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 FASP25445 335 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 KRR1Q13601 381 aaKnown RBP15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 ATP6AP1Q15904 470 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 SHQ1Q6PI26 577 aaKnown RBP15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 FOXL2NBQ6ZUU3 175 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 DEPDC4Q8N2C3 294 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 GTPBP3Q969Y2 492 aaKnown RBP15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 RASD2Q96D21 266 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 ZNF75AQ96N20 296 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 SLC38A2Q96QD8 506 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 RAB3IPQ96QF0 476 aaPredicted RBP15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 BDH2Q9BUT1 245 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 IFT27Q9BW83 186 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 ZNF224Q9NZL3 707 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 ST6GALNAC2Q9UJ37 374 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 FBXL3Q9UKT7 428 aa15.77■□□□□ 0.12
CNKSR1-208ENST00000484874 HEATR1Q9H583 2144 aaKnown RBP15.77■□□□□ 0.11
CNKSR1-208ENST00000484874 ROS1P08922 2347 aa15.77■□□□□ 0.11
CNKSR1-208ENST00000484874 IGHV1-18A0A0C4DH31 117 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 SHISA9B4DS77 424 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 BHLHE40O14503 412 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 ABCD4O14678 606 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 HS3ST1O14792 307 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 SEC14L2O76054 403 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 UBL3O95164 117 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 SLC2A10O95528 541 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 PPP1R3DO95685 299 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 TP53P04637 393 aaPredicted RBP15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 CDKN2AP42771 156 aaKnown RBP15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 RAB1AP62820 205 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 GSG1Q2KHT4 349 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 ZNF672Q499Z4 452 aaPredicted RBP15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 FAM27BQ5VT28 67 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 C20orf204Q6ZNR8 217 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 ZNF611Q8N823 705 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 OR52L1Q8NGH7 329 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 OR5K1Q8NHB7 308 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 NIPSNAP1Q9BPW8 284 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 WACQ9BTA9 647 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 LIME1Q9H400 295 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 EGLN3Q9H6Z9 239 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 BAIAP2Q9UQB8 552 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 LRBAP50851 2863 aa15.76■□□□□ 0.11
CNKSR1-208ENST00000484874 NAV2Q8IVL1 2488 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 ZNF503-AS2A6NEH8 195 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 SOCS2O14508 198 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 HLA-HP01893 362 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 NOS3P29474 1203 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 TUBA1BP68363 451 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 TUBA4AP68366 448 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 FMODQ06828 376 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 PAMR1Q6UXH9 720 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 PTCHD4Q6ZW05 846 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 TUBA1AQ71U36 451 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 CDH24Q86UP0 819 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 MDP1Q86V88 176 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 LNX2Q8N448 690 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 DNAJC9Q8WXX5 260 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 AKAP1Q92667 903 aaKnown RBP eCLIP15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 NABP1Q96AH0 204 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 ZNF556Q9HAH1 456 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 REV1Q9UBZ9 1251 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 AKAP6Q13023 2319 aa15.75■□□□□ 0.11
CNKSR1-208ENST00000484874 TMCC2O75069 709 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 RAF1P04049 648 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 CD79AP11912 226 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 HIST1H1CP16403 213 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 PRKACGP22612 351 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 CRABP1P29762 137 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 CAPZA2P47755 286 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 GABPB1Q06547 395 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 KPNB1Q14974 876 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 SLC36A2Q495M3 483 aa15.74■□□□□ 0.11
CNKSR1-208ENST00000484874 ZNF362Q5T0B9 420 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms