RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 NDUFS3O75489 264 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 APODP05090 189 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 MMP3P08254 477 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PPIBP23284 216 aaKnown RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TFPI2P48307 235 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PCBP3P57721 371 aaKnown RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SELENOTP62341 195 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RAB1AP62820 205 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ARHGAP1Q07960 439 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ELOBQ15370 118 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PRAMEF14Q5SWL7 426 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 GALNTL5Q7Z4T8 443 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TMED4Q7Z7H5 227 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RNF175Q8N4F7 328 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SLC35G3Q8N808 338 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 HAS2Q92819 552 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM159Q96B96 161 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RRNAD1Q96FB5 475 aaKnown RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 NUDT11Q96G61 164 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TBX5Q99593 518 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 EXO5Q9H790 373 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 NT5MQ9NPB1 228 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF223Q9UK11 482 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 POMT1Q9Y6A1 747 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 KIF26AQ9ULI4 1882 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ACOT7O00154 380 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 FLRT2O43155 660 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF208O43345 1280 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM127O75204 238 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ZFPL1O95159 310 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RPN2P04844 631 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ANXA5P08758 320 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ELFN1P0C7U0 828 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ITPKBP27987 946 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ACVR1BP36896 505 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RAP1BP61224 184 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PAX5Q02548 391 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PCGF3Q3KNV8 242 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM69Q5SWH9 247 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 FAHD2BQ6P2I3 314 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 METTL7BQ6UX53 244 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 RPTNQ6XPR3 784 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 LRRC56Q8IYG6 542 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 OR4K17Q8NGC6 315 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 OR4K14Q8NGD5 310 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 C1orf216Q8TAB5 229 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SOCS4Q8WXH5 440 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 FAHD2AQ96GK7 314 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SCRT1Q9BWW7 348 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM121BQ9BXQ6 578 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 OSER1Q9NX31 292 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ANKRD10Q9NXR5 420 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 AMDHD2Q9Y303 409 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TRBV11-1A0A0K0K1C0 115 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 DHRS7CA6NNS2 312 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 J3QRE1 110 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PLPP2O43688 288 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 LRP3O75074 770 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PMS2P2O95744 297 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TRBC1P01850 177 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 LMO2P25791 158 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PTSQ03393 145 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ZP2Q05996 745 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 HAGHQ16775 308 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 Q5PR19 223 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 OR8G2PQ6IF36 304 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PODNL1Q6PEZ8 512 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 LCTLQ6UWM7 567 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 CD300LDQ6UXZ3 194 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 CHST9Q7L1S5 443 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 TAS1R1Q7RTX1 841 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 LYG1Q8N1E2 194 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 OR9A4Q8NGU2 314 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF296Q8WUU4 475 aaPredicted RBP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PGLYRP3Q96LB9 341 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SPON2Q9BUD6 331 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SLC26A1Q9H2B4 701 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.13□□□□□ -1.27
COL4A5-205ENST00000483338 SLC2A4RGQ9NR83 387 aa7.13□□□□□ -1.27
COL4A5-205ENST00000483338 PAPPA2Q9BXP8 1791 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TRAV1-2A0A0B4J238 106 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 C20orf202A1L168 122 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PEX12O00623 359 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PLRG1O43660 514 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 HBP1O60381 514 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 GJB3O75712 270 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 DFFBO76075 338 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CH25HO95992 272 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PNPP00491 289 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 RAB6AP20340 208 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 C4orf17Q53FE4 359 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 FCRLAQ7L513 359 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MRGPREQ86SM8 312 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 VRK2Q86Y07 508 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR4D11Q8NGI4 311 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR51G2Q8NGK0 314 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms