RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 GPR4P46093 362 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 CTXN1P60606 82 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 RAP1BP61224 184 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 RPL27P61353 136 aaKnown RBP10.28□□□□□ -0.76
HMGN1-213ENST00000482192 RAP1AP62834 184 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 MRPS34P82930 218 aaKnown RBP10.28□□□□□ -0.76
HMGN1-213ENST00000482192 MYBPC1Q00872 1141 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 GALK2Q01415 458 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 CD47Q08722 323 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 RAB39AQ14964 217 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 KRT72Q14CN4 511 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 FGD3Q5JSP0 725 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 KRT80Q6KB66 452 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 TMEM53Q6P2H8 277 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 TBPL2Q6SJ96 375 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 SLC16A14Q7RTX9 510 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 IGFN1Q86VF2 1251 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 MEX3DQ86XN8 651 aaKnown RBP10.28□□□□□ -0.76
HMGN1-213ENST00000482192 ZNF584Q8IVC4 421 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 DEFB107AQ8IZN7 70 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 ZNF525Q8N782 197 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 LRRC75AQ8NAA5 344 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 SLC7A13Q8TCU3 470 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 NMD3Q96D46 503 aaKnown RBP10.28□□□□□ -0.76
HMGN1-213ENST00000482192 POM121Q96HA1 1249 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 C7orf34Q96L11 122 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 TNFRSF13CQ96RJ3 184 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 CCT8L2Q96SF2 557 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 ALG12Q9BV10 488 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 C1orf198Q9H425 327 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 KRCC1Q9NPI7 259 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-213ENST00000482192 CD300AQ9UGN4 299 aa10.28□□□□□ -0.76
HMGN1-213ENST00000482192 CDC42EP2O14613 210 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ARPC2O15144 300 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ERCC1P07992 297 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 RPL4P36578 427 aaKnown RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 PPOXP50336 477 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 RPS23P62266 143 aaKnown RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 VLDLRP98155 873 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FMODQ06828 376 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FHL1Q13642 323 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ZBED5Q49AG3 693 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 THEM4Q5T1C6 240 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 PODNL1Q6PEZ8 512 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 SVOPLQ8N434 492 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FITM2Q8N6M3 262 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 OR10H5Q8NGA6 315 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ZNF519Q8TB69 540 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FAM168AQ92567 244 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 MCUR1Q96AQ8 359 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 PYURFQ96I23 114 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 FAM46AQ96IP4 442 aaKnown RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 NSMCE2Q96MF7 247 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 TSPAN32Q96QS1 320 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 RBP7Q96R05 134 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 VRK1Q99986 396 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 KCNN2Q9H2S1 579 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 RNF121Q9H920 327 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 SIAEQ9HAT2 523 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 GRHPRQ9UBQ7 328 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 SLC7A8Q9UHI5 535 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ZNF346Q9UL40 294 aaKnown RBP10.27□□□□□ -0.77
HMGN1-213ENST00000482192 UGT2A1Q9Y4X1 527 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 V9GYQ6 96 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 CADP27708 2225 aa10.27□□□□□ -0.77
HMGN1-213ENST00000482192 ARID1AO14497 2285 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 IGHV4-30-2A0A087WSY4 118 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 IQCMA0A1B0GVH7 501 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 DIRAS1O95057 198 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 PTHP01270 115 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 SEMG1P04279 462 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 SLC25A16P16260 332 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-213ENST00000482192 GLRXP35754 106 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 LIMS1P48059 325 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 SMIM11AP58511 58 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 PLP2Q04941 152 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 LRRC18Q8N456 261 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 ARIH2OSQ8N7S6 290 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 CCDC197Q8NCU1 140 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 NSMAFQ92636 917 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 DHRS1Q96LJ7 313 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 SORCS2Q96PQ0 1159 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 DOK1Q99704 481 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 RAB1BQ9H0U4 201 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 DYNLRB1Q9NP97 96 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 MYOZ1Q9NP98 299 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-213ENST00000482192 CCNB1IP1Q9NPC3 277 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 CMAHPQ9Y471 501 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 USF3Q68DE3 2245 aa10.26□□□□□ -0.77
HMGN1-213ENST00000482192 ACANP16112 2415 aa10.25□□□□□ -0.77
HMGN1-213ENST00000482192 TRBV4-1A0A0J9YWV2 114 aa10.25□□□□□ -0.77
HMGN1-213ENST00000482192 SLC22A23A1A5C7 686 aa10.25□□□□□ -0.77
HMGN1-213ENST00000482192 B2RBV5 119 aa10.25□□□□□ -0.77
HMGN1-213ENST00000482192 XKRYO14609 159 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms