RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 PODNL1Q6PEZ8 512 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 SLC16A14Q7RTX9 510 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 DPPA2Q7Z7J5 298 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 FITM2Q8N6M3 262 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 FAM86B1Q8N7N1 296 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 SLC7A13Q8TCU3 470 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 HTRA1Q92743 480 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 HDAC2Q92769 488 aaKnown RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 RBP7Q96R05 134 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 TNFRSF13CQ96RJ3 184 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ALG12Q9BV10 488 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ZNF224Q9NZL3 707 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 CD300AQ9UGN4 299 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 ZNF346Q9UL40 294 aaKnown RBP12.84□□□□□ -0.35
OPTN-210ENST00000482140 FKBP7Q9Y680 259 aa12.84□□□□□ -0.35
OPTN-210ENST00000482140 A6NIZ1 184 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 RNF223E7ERA6 249 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 SLC2A10O95528 541 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 LY6G6DO95868 133 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 HEXAP06865 529 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 NPR2P20594 1047 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 THBS4P35443 961 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
OPTN-210ENST00000482140 SMIM11AP58511 58 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 DSCR9P59020 149 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 RAP1BP61224 184 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 RAP1AP62834 184 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 VLDLRP98155 873 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 SPIBQ01892 262 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 NRN1LQ496H8 165 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 ZBED5Q49AG3 693 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
OPTN-210ENST00000482140 FNDC8Q8TC99 324 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 NSMAFQ92636 917 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 FAM46AQ96IP4 442 aaKnown RBP12.83□□□□□ -0.36
OPTN-210ENST00000482140 NSL1Q96IY1 281 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 C7orf34Q96L11 122 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 KCNK17Q96T54 332 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 SEPHS2Q99611 448 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
OPTN-210ENST00000482140 REG4Q9BYZ8 158 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 SMURF2Q9HAU4 748 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 FBXO9Q9UK97 447 aaPredicted RBP12.83□□□□□ -0.36
OPTN-210ENST00000482140 AURKCQ9UQB9 309 aa12.83□□□□□ -0.36
OPTN-210ENST00000482140 B2RBV5 119 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 CDC42EP2O14613 210 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 MGRN1O60291 552 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 GADD45GO95257 159 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 PTHP01270 115 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 SERPINA5P05154 406 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
OPTN-210ENST00000482140 EFNA4P52798 201 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 RPS23P62266 143 aaKnown RBP12.82□□□□□ -0.36
OPTN-210ENST00000482140 ERVK-25P63136 954 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 PLP2Q04941 152 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 FMODQ06828 376 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 EFNB3Q15768 340 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 SGCAQ16586 387 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 FXNQ16595 210 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 LRRC18Q8N456 261 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 LRRC75AQ8NAA5 344 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 OR52J3Q8NH60 311 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 ZNF75AQ96N20 296 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 C1orf198Q9H425 327 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 CCNB1IP1Q9NPC3 277 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 GRHPRQ9UBQ7 328 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 CMAHPQ9Y471 501 aa12.82□□□□□ -0.36
OPTN-210ENST00000482140 TRBV4-1A0A0J9YWV2 114 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 IQCMA0A1B0GVH7 501 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 XKRYO14609 159 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 NDUFB2O95178 105 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 FABP3P05413 133 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ERCC1P07992 297 aaPredicted RBP12.81□□□□□ -0.36
OPTN-210ENST00000482140 CD14P08571 375 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 CSF3P09919 207 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ZNF35P13682 527 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 CALB2P22676 271 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 NR4A1P22736 598 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 CDAP32320 146 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 MRPS34P82930 218 aaKnown RBP12.81□□□□□ -0.36
OPTN-210ENST00000482140 HSF2Q03933 536 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ZNF525Q8N782 197 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ARIH2OSQ8N7S6 290 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ZNF519Q8TB69 540 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 FAM168AQ92567 244 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 ZNF570Q96NI8 536 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
OPTN-210ENST00000482140 CDH20Q9HBT6 801 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms