RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 RGNQ15493 299 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 TAF7Q15545 349 aaPredicted RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 DPYSL2Q16555 572 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 CALHM1Q8IU99 346 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 ARL6IP6Q8N6S5 226 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 CIRBP-AS1Q8TBR5 109 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 SYAP1Q96A49 352 aaPredicted RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 ZNF681Q96N22 645 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 RIBC2Q9H4K1 309 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 FARSBQ9NSD9 589 aaKnown RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 SAMSN1Q9NSI8 373 aaKnown RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 ACTR3BQ9P1U1 418 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 CGNQ9P2M7 1197 aaKnown RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 DHCR7Q9UBM7 475 aaKnown RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 CDH9Q9ULB4 789 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 AURKCQ9UQB9 309 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 AP1M2Q9Y6Q5 423 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 DDX49Q9Y6V7 483 aaKnown RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 U3KQV3 271 aa1.2□□□□□ -2.22
CCNL1-223ENST00000481173 RPAP1Q9BWH6 1393 aaPredicted RBP1.2□□□□□ -2.22
CCNL1-223ENST00000481173 SCN4AP35499 1836 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 A0A1B0GW55 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DNASE2O00115 360 aaPredicted RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 GUCA1CO95843 209 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 HLA-DQA1P01909 254 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 HEXBP07686 556 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4L2P0CJ85 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4L3P0CJ86 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4L5P0CJ88 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4L6P0CJ89 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4L7P0CJ90 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CCR1P32246 355 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CEACAM6P40199 344 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CDKN1BP46527 198 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CXCL12P48061 93 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 RORCP51449 518 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 BPIFB3P59826 476 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 POLR2FP61218 127 aaKnown RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 HMGN5P82970 282 aaKnown RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 HTD2P86397 168 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 FLI1Q01543 452 aaPredicted RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 IFT88Q13099 833 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 MAB21L1Q13394 359 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 MESDQ14696 234 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 ZSCAN26Q16670 478 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TRIM40Q6P9F5 258 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TMEM205Q6UW68 189 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 LINC00336Q6ZUF6 198 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TMEM179Q6ZVK1 233 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 VSTM4Q8IW00 320 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 PUSL1Q8N0Z8 303 aaKnown RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CEP112Q8N8E3 955 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 ZNF557Q8N988 423 aaPredicted RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TMEM104Q8NE00 496 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 NOXO1Q8NFA2 376 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 OR4K5Q8NGD3 323 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 OR4S2Q8NH73 311 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TRMT10AQ8TBZ6 339 aaKnown RBP1.19□□□□□ -2.22
CCNL1-223ENST00000481173 C15orf40Q8WUR7 153 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 RSPH1Q8WYR4 309 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 CREB3L1Q96BA8 519 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TTC25Q96NG3 672 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 FAIM2Q9BWQ8 316 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 SLC25A2Q9BXI2 301 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TAS2R3Q9NYW6 316 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 BFARQ9NZS9 450 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 DUX4Q9UBX2 424 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 SH3BGRL2Q9UJC5 107 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 TMCC3Q9ULS5 477 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 IKBKGQ9Y6K9 419 aa1.19□□□□□ -2.22
CCNL1-223ENST00000481173 PLXNB1O43157 2135 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 ARPC4-TTLL3A0A0A6YYG9 625 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 MPHOSPH10O00566 681 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 RAMP3O60896 148 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 UTS2O95399 124 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 GLAP06280 429 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 UBTFL6P0CB48 400 aaPredicted RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 NCF1P14598 390 aaPredicted RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 SSR1P43307 286 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 RGS4P49798 205 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 PRKCDQ05655 676 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 GANABQ14697 944 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 LRRC23Q53EV4 343 aaPredicted RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 RIPPLY2Q5TAB7 128 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 NUDCD3Q8IVD9 361 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 FAM110BQ8TC76 370 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 THRSPQ92748 146 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 FAM3DQ96BQ1 224 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 FLYWCH2Q96CP2 140 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 SHANK2-AS3Q9BTD1 123 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 TPPP3Q9BW30 176 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 ANGPTL4Q9BY76 406 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 DHX35Q9H5Z1 703 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 RPF2Q9H7B2 306 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 PALMDQ9NP74 551 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 DDX19AQ9NUU7 478 aaKnown RBP1.18□□□□□ -2.22
CCNL1-223ENST00000481173 KLHL28Q9NXS3 571 aa1.18□□□□□ -2.22
CCNL1-223ENST00000481173 CTSFQ9UBX1 484 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms