RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	TMEM129	A0AVI4	362 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	SH3PXD2B	A1X283	911 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116		H7C1C5	153 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ARPC2	O15144	300 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	GPRIN2	O60269	458 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	CCL2	P13500	99 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF35	P13682	527 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF26	P17031	533 aa	Predicted RBP	11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	RHCE	P18577	417 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	NPR2	P20594	1047 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF84	P51523	738 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	LCN6	P62502	163 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ERVK-25	P63136	954 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	KRTAP1-1	Q07627	177 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	SEC23B	Q15437	767 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	IQCC	Q4KMZ1	466 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	SAMD4B	Q5PRF9	694 aa	Known RBP	11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	SLC25A47	Q6Q0C1	308 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	C16orf89	Q6UX73	402 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	RRM2B	Q7LG56	351 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	CDK20	Q8IZL9	346 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	SVOPL	Q8N434	492 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	NMD3	Q96D46	503 aa	Known RBP	11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	PYURF	Q96I23	114 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	FZR1	Q9UM11	496 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	FAM32A	Q9Y421	112 aa	Known RBP	11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	UGT2A1	Q9Y4X1	527 aa		11.12	□□□□□ -0.63
ABCF3-215	ENST00000481116	HTR3E	A5X5Y0	456 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	FAM171A2	A8MVW0	826 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116		B2RBV5	119 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116		B9A039	149 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	FARS2	O95363	451 aa	Known RBP	11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	IGHM	P01871	453 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	SEMG1	P04279	462 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	BMP4	P12644	408 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	NR4A1	P22736	598 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	SLC9A3	P48764	834 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF133	P52736	654 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	EFNA4	P52798	201 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	SNRPD2	P62316	118 aa	Known RBP	11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	SGCA	Q16586	387 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	FXN	Q16595	210 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZBED5	Q49AG3	693 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	C10orf128	Q5T292	105 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	RINL	Q6ZS11	566 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	TMPRSS11F	Q6ZWK6	438 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	SLC16A14	Q7RTX9	510 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	HDDC2	Q7Z4H3	204 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	IL17RD	Q8NFM7	739 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	OR10H5	Q8NGA6	315 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF519	Q8TB69	540 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	NABP1	Q96AH0	204 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	POM121	Q96HA1	1249 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	NSL1	Q96IY1	281 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	NSMCE2	Q96MF7	247 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	RHNO1	Q9BSD3	238 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	OR51B6	Q9H340	312 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	PLK3	Q9H4B4	646 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ANKRD19P	Q9H560	264 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ZNF442	Q9H7R0	627 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	IL20RA	Q9UHF4	553 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	MAGEL2	Q9UJ55	1249 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116	ADAM18	Q9Y3Q7	739 aa		11.11	□□□□□ -0.63
ABCF3-215	ENST00000481116		A0A1W2PRQ8	180 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	NPIPB13	A6NJU9	1138 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	CENPBD1	B2RD01	187 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	NPIPB4	C9JG80	1138 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	PDE5A	O76074	875 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	FAM107A	O95990	144 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	F12	P00748	615 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	SERPINA5	P05154	406 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	IGFBP1	P08833	259 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	MMP7	P09237	267 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	PCSK6	P29122	969 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	RPL4	P36578	427 aa	Known RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	OMP	P47874	163 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	SPIB	Q01892	262 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	DGCR6	Q14129	220 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	KRT72	Q14CN4	511 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	TAF11	Q15544	211 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	EFNB3	Q15768	340 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	TMEM53	Q6P2H8	277 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	CLEC2A	Q6UVW9	174 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	CYP2R1	Q6VVX0	501 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	LRP11	Q86VZ4	500 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	FAM168A	Q92567	244 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116		Q96M85	177 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	FOXN4	Q96NZ1	517 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	DOK1	Q99704	481 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	GPA33	Q99795	319 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	FUZ	Q9BT04	418 aa		11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	MRPL37	Q9BZE1	423 aa	Known RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	STX18	Q9P2W9	335 aa	Known RBP	11.1	□□□□□ -0.63
ABCF3-215	ENST00000481116	CSPG4	Q6UVK1	2322 aa		11.09	□□□□□ -0.63
ABCF3-215	ENST00000481116	ANK3	Q12955	4377 aa	Known RBP	11.09	□□□□□ -0.63
ABCF3-215	ENST00000481116	FN1	P02751	2386 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms