RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 GMNNO75496 209 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 PRSS23O95084 383 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 IGHMP01871 453 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 PATE4P0C8F1 98 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 NCK1P16333 377 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 MAKP20794 623 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 RPL27P61353 136 aaKnown RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 MRPS34P82930 218 aaKnown RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
TDP2-205ENST00000480495 VLDLRP98155 873 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 MYBPC1Q00872 1141 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 FXNQ16595 210 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 GKAP1Q5VSY0 366 aaPredicted RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 ZNF730Q6ZMV8 503 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 MBOAT2Q6ZWT7 520 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 OAFQ86UD1 273 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 ZNF584Q8IVC4 421 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 ANKS4BQ8N8V4 417 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 FGFBP3Q8TAT2 258 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 NEU4Q8WWR8 484 aaPredicted RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 HDAC2Q92769 488 aaKnown RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.33
TDP2-205ENST00000480495 KCNK17Q96T54 332 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 PIMREGQ9BSJ6 248 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 ALG12Q9BV10 488 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 RNF121Q9H920 327 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 ADA2Q9NZK5 511 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
TDP2-205ENST00000480495 SLC22A23A1A5C7 686 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 A6NIZ1 184 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 SYNGR3O43761 229 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 GPRIN2O60269 458 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 CRLF1O75462 422 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 FUT4P22083 530 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 CTXN1P60606 82 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 RAP1BP61224 184 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 RAP1AP62834 184 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 PLP2Q04941 152 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 CD47Q08722 323 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 THEM4Q5T1C6 240 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 GLYATQ6IB77 296 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 RRM2BQ7LG56 351 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 FAM156AQ8NDB6 213 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 RBP7Q96R05 134 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 KCNN2Q9H2S1 579 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 NMNAT1Q9HAN9 279 aaPredicted RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 DCAF13Q9NV06 445 aaKnown RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 EGFL7Q9UHF1 273 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
TDP2-205ENST00000480495 FAM32AQ9Y421 112 aaKnown RBP12.95□□□□□ -0.34
TDP2-205ENST00000480495 TRAV27A0A087WT01 109 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 IQCMA0A1B0GVH7 501 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 VWC2LB2RUY7 222 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 SLC2A10O95528 541 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 NR4A2P43354 598 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 GNGT1P63211 74 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 FHL1Q13642 323 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 DGCR6Q14129 220 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 SLC25A47Q6Q0C1 308 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 TMPRSS11FQ6ZWK6 438 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 TSEN54Q7Z6J9 526 aaKnown RBP12.94□□□□□ -0.34
TDP2-205ENST00000480495 LRRC75AQ8NAA5 344 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 RBM15BQ8NDT2 890 aaKnown RBP12.94□□□□□ -0.34
TDP2-205ENST00000480495 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
TDP2-205ENST00000480495 NDEL1Q9GZM8 345 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 LRMDAQ9H2I8 198 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 GORASP2Q9H8Y8 452 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 CDH20Q9HBT6 801 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 ZNF346Q9UL40 294 aaKnown RBP12.94□□□□□ -0.34
TDP2-205ENST00000480495 ARL2BPQ9Y2Y0 163 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 UGT2A1Q9Y4X1 527 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 ABCA2Q9BZC7 2435 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 CR1P17927 2039 aa12.94□□□□□ -0.34
TDP2-205ENST00000480495 SH3PXD2BA1X283 911 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 A8MV72 311 aaPredicted RBP12.93□□□□□ -0.34
TDP2-205ENST00000480495 M0R233 179 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 SNAP29O95721 258 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 H1F0P07305 194 aaKnown RBP12.93□□□□□ -0.34
TDP2-205ENST00000480495 ADRA2AP08913 450 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 MMP7P09237 267 aaPredicted RBP12.93□□□□□ -0.34
TDP2-205ENST00000480495 RHCEP18577 417 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 GUCA1AP43080 201 aaPredicted RBP12.93□□□□□ -0.34
TDP2-205ENST00000480495 HSF2Q03933 536 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 FMODQ06828 376 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 CARTPTQ16568 116 aa12.93□□□□□ -0.34
TDP2-205ENST00000480495 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms