RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ZNF544Q6NX49 715 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 CD300LDQ6UXZ3 194 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 ADCK1Q86TW2 530 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 SLC22A24Q8N4F4 322 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF75AQ96N20 296 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 TSPAN32Q96QS1 320 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 GPA33Q99795 319 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 DGCR6LQ9BY27 220 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 REEP1Q9H902 201 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 SIAEQ9HAT2 523 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 FAIMQ9NVQ4 179 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 IL20Q9NYY1 176 aa13.48□□□□□ -0.25
C9orf3-217ENST00000479161 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 A0A1W2PR80 420 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 M0R1B8 84 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 CRYAAP02489 173 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 RPS6KA3P51812 740 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 COX10Q12887 443 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 ALKBH2Q6NS38 261 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 DTX2Q86UW9 622 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 OR4F15Q8NGB8 312 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 DUS3LQ96G46 650 aaKnown RBP13.47□□□□□ -0.25
C9orf3-217ENST00000479161 UBTD1Q9HAC8 227 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF701Q9NV72 531 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-217ENST00000479161 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF224Q9NZL3 707 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 PLEKHA6Q9Y2H5 1048 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 USF3Q68DE3 2245 aa13.47□□□□□ -0.25
C9orf3-217ENST00000479161 PRSS37A4D1T9 235 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 OVOL3O00110 214 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 XKRYO14609 159 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 CCNB2O95067 398 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 B4GALT1P15291 398 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 GSTM3P21266 225 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SLC6A6P31641 620 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 ERVK-25P63136 954 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 NAAAQ02083 359 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 FAM27BQ5VT28 67 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SLC22A25Q6T423 547 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 PRSS57Q6UWY2 283 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 THSD4Q6ZMP0 1018 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 RASSF6Q6ZTQ3 369 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 MEX3DQ86XN8 651 aaKnown RBP13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SYT14Q8NB59 555 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 KBTBD8Q8NFY9 601 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SMAP2Q8WU79 429 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF570Q96NI8 536 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 DHRS9Q9BPW9 319 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 GSX2Q9BZM3 304 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 OR52D1Q9H346 318 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 C1orf198Q9H425 327 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 VSX1Q9NZR4 365 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.25
C9orf3-217ENST00000479161 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
C9orf3-217ENST00000479161 SLC22A23A1A5C7 686 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CST1P01037 141 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 PTHP01270 115 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 SERPINA5P05154 406 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CECR9P0C854 216 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-217ENST00000479161 GUCA1AP43080 201 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CDH11P55287 796 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 RAB1AP62820 205 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CD47Q08722 323 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 SYT9Q86SS6 491 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 MDP1Q86V88 176 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 SPATA24Q86W54 205 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 SKA3Q8IX90 412 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 NUP37Q8NFH4 326 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 TMEM171Q8WVE6 324 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 Q96M85 177 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CCL19Q99731 98 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 C1QTNF6Q9BXI9 259 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CXorf56Q9H5V9 222 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 FBXO9Q9UK97 447 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-217ENST00000479161 ADAM18Q9Y3Q7 739 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 CELSR1Q9NYQ6 3014 aa13.45□□□□□ -0.26
C9orf3-217ENST00000479161 ZNF503-AS2A6NEH8 195 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 E7EQL1 145 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 EBAG9O00559 213 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 GASTP01350 101 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 HLA-HP01893 362 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
C9orf3-217ENST00000479161 ART1P52961 327 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-217ENST00000479161 KRR1Q13601 381 aaKnown RBP13.44□□□□□ -0.26
C9orf3-217ENST00000479161 PGGHGQ32M88 737 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 MESTQ5EB52 335 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms