RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GGTA1PQ4G0N0 100 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 Q6ZSA8 131 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 TCF24Q7RTU0 167 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 TMEM135Q86UB9 458 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 CCDC65Q8IXS2 484 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 KDM8Q8N371 416 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 OR52B4Q8NGK2 314 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 UFD1Q92890 307 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 STMN2Q93045 179 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 ATP6V1E2Q96A05 226 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 C7orf34Q96L11 122 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 RIT2Q99578 217 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 GPA33Q99795 319 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 SH3GL3Q99963 347 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 OR52D1Q9H346 318 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 MCCC2Q9HCC0 563 aa0.42□□□□□ -2.34
HPS3-205ENST00000478525 CGNQ9P2M7 1197 aaKnown RBP0.42□□□□□ -2.34
HPS3-205ENST00000478525 VWA8A3KMH1 1905 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 A0A1W2PRQ8 180 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 GOLGA6L4A6NEF3 574 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 HIDE1A8MVS5 230 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 MGRN1O60291 552 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 MT-ATP6P00846 226 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 CT62P0C5K7 136 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 ZNF35P13682 527 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 FUT1P19526 365 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 IMPDH1P20839 514 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 AK4P27144 223 aaPredicted RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 GCAP28676 217 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 HSD17B2P37059 387 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 DEFB103AP81534 67 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 GAMTQ14353 236 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 ARHGAP19Q14CB8 494 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 SLC10A5Q5PT55 438 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 RAB12Q6IQ22 244 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 RBM43Q6ZSC3 357 aaKnown RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 TMEM179Q6ZVK1 233 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 SLC16A13Q7RTY0 426 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 WDFY1Q8IWB7 410 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 SLC35F2Q8IXU6 374 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 SPC24Q8NBT2 197 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 CMTM2Q8TAZ6 248 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 LKAAEAR1Q8TD35 194 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 MAIP1Q8WWC4 291 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 EFHD2Q96C19 240 aaPredicted RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 ZBED3Q96IU2 234 aaPredicted RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 EDEM2Q9BV94 578 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 NHEJ1Q9H9Q4 299 aaPredicted RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 IL19Q9UHD0 177 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 MGAT4BQ9UQ53 548 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 CHMP2BQ9UQN3 213 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 KIF3AQ9Y496 699 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 HYOU1Q9Y4L1 999 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 TSSC4Q9Y5U2 329 aaPredicted RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 MRPS18BQ9Y676 258 aaKnown RBP0.41□□□□□ -2.34
HPS3-205ENST00000478525 MSH6P52701 1360 aa0.41□□□□□ -2.34
HPS3-205ENST00000478525 SPAG9O60271 1321 aaKnown RBP0.4□□□□□ -2.34
HPS3-205ENST00000478525 FBN2P35556 2912 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 TRAV39A0A0B4J263 110 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 IGHV1OR15-9A0A0B4J2B8 117 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 RNF103-CHMP3A0A140T963 221 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 TCRBV9S1A1TA0A576 114 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 A8MXQ7 604 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 D6RAR5 112 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 DNALI1O14645 258 aaPredicted RBP0.4□□□□□ -2.35
HPS3-205ENST00000478525 POLR2DO15514 142 aaKnown RBP0.4□□□□□ -2.35
HPS3-205ENST00000478525 SCGNO76038 276 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 NEBLO76041 1014 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 RAB3DO95716 219 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 AP2A1O95782 977 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 ZNF688P0C7X2 276 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CALM1P0DP23 149 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CALM2P0DP24 149 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CALM3P0DP25 149 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CCNB1P14635 433 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 TCN1P20061 433 aaPredicted RBP0.4□□□□□ -2.35
HPS3-205ENST00000478525 NT5EP21589 574 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 MMP11P24347 488 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 HTR2AP28223 471 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CCND2P30279 289 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 RORAP35398 523 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 SCRN3Q0VDG4 424 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 DUSP7Q16829 419 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 PGGHGQ32M88 737 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 SP6Q3SY56 376 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 KCTD21Q4G0X4 260 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 WDR59Q6PJI9 974 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 ARL9Q6T311 187 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CATSPER4Q7RTX7 472 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 CDR2LQ86X02 465 aaPredicted RBP0.4□□□□□ -2.35
HPS3-205ENST00000478525 LIX1Q8N485 282 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 OR6N1Q8NGY5 312 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 SLC13A3Q8WWT9 602 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 TMEM117Q9H0C3 514 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 MEAF6Q9HAF1 191 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 SMOXQ9NWM0 555 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 TERF2IPQ9NYB0 399 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 RPH3ALQ9UNE2 315 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 DDX49Q9Y6V7 483 aaKnown RBP0.4□□□□□ -2.35
HPS3-205ENST00000478525 KDRP35968 1356 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms