RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TRUB1Q8WWH5 349 aaKnown RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 NPIPB3Q92617 1050 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 TLCD1Q96CP7 247 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 NTNG2Q96CW9 530 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 COQ8BQ96D53 544 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ZBED6CLQ96FA7 236 aaPredicted RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 OTUB1Q96FW1 271 aaPredicted RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 MS4A14Q96JA4 679 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 RITA1Q96K30 269 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF599Q96NL3 588 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ALKBH3Q96Q83 286 aaPredicted RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 CNN2Q99439 309 aaKnown RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 SEPHS2Q99611 448 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 TIMM29Q9BSF4 260 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 FEM1AQ9BSK4 669 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 TMEM208Q9BTX3 173 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 SPRTNQ9H040 489 aaPredicted RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ARV1Q9H2C2 271 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 TLE6Q9H808 572 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 WFDC1Q9HC57 220 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ANKHQ9HCJ1 492 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 AGPAT4Q9NRZ5 378 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 SPANXA1Q9NS26 97 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ADARB2Q9NS39 739 aaKnown RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 GKN1Q9NS71 199 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ACOXLQ9NUZ1 547 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 B3GNT2Q9NY97 397 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 GSKIPQ9P0R6 139 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 P2RX2Q9UBL9 471 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 GHRLQ9UBU3 117 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 SLC12A6Q9UHW9 1150 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF225Q9UK10 706 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 MRTO4Q9UKD2 239 aaKnown RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 RPL26L1Q9UNX3 145 aaKnown RBP3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 RAP2CQ9Y3L5 183 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 MTCH2Q9Y6C9 303 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 PRSS21Q9Y6M0 314 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 KIF20BQ96Q89 1820 aa3.13□□□□□ -1.91
FNDC3B-209ENST00000478016 A0A1W2PP64 1363 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 KTN1Q86UP2 1357 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 VIRMAQ69YN4 1812 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 PPIAL4CA0A0B4J2A2 164 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 HIDE1A8MVS5 230 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 HACD1B0YJ81 288 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 MS4A18H0YCH9 400 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CXCR6O00574 342 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 PLPP3O14495 311 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 AZIN1O14977 448 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 RGS5O15539 181 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 FGF16O43320 207 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CHST10O43529 356 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 DUSP11O75319 330 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF217O75362 1048 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 LYPLA1O75608 230 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 OR2J2O76002 312 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 PAK4O96013 591 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 TIMP1P01033 207 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ISG15P05161 165 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CSN3P07498 182 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 SFTPBP07988 381 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CST2P09228 141 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 OR8U9P0C7N5 309 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 PPIAL4GP0DN37 164 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 VPREB1P12018 145 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 LYL1P12980 280 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF182P17025 639 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 GPX2P18283 190 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CA4P22748 312 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 IVDP26440 423 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CERS1P27544 350 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ADORA1P30542 326 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 DDOSTP39656 456 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 RFC3P40938 356 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 EFNA3P52797 238 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 KLF3P57682 345 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 RPL26P61254 145 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 MRPS34P82930 218 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ACVR1Q04771 509 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 FOXF2Q12947 444 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 MLLT11Q13015 90 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 DNASE1L3Q13609 305 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 FASTKQ14296 549 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 KRT33BQ14525 404 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ABRAXAS2Q15018 415 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 MRPL23Q16540 153 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 DGUOKQ16854 277 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 SMIM21Q3B7S5 101 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF528Q3MIS6 628 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 CDNFQ49AH0 187 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 GPR33Q49SQ1 333 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 DCAF10Q5QP82 559 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 PNCKQ6P2M8 343 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 HAGHLQ6PII5 290 aaPredicted RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 BTNL8Q6UX41 500 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 FAM131AQ6UXB0 335 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 MBOAT1Q6ZNC8 495 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 RBM44Q6ZP01 1051 aaKnown RBP3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 LINC00336Q6ZUF6 198 aa3.12□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms