RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CCNYL1Q8N7R7 359 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 PNPT1Q8TCS8 783 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 KLF14Q8TD94 323 aaPredicted RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 LRTOMTQ8WZ04 291 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TXNDC15Q96J42 360 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 PLEKHA8Q96JA3 519 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TBX15Q96SF7 602 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 PCGF1Q9BSM1 259 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 CDADC1Q9BWV3 514 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TRIM15Q9C019 465 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 C1orf198Q9H425 327 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TUBB1Q9H4B7 451 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 RLIMQ9NVW2 624 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 VPREB3Q9UKI3 123 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 DOCK11Q5JSL3 2073 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TET2Q6N021 2002 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 IGHV1-69DA0A0B4J2H0 117 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ADARB2-AS1A8MUL3 147 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 C22orf46C9J442 243 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 M0R082 166 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 CFLARO15519 480 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 AKAP8O43823 692 aaKnown RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 CRCPO75575 148 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 AHSA1O95433 338 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 HPRP00739 348 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 IGHV1-69P01742 117 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 F13BP05160 661 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 GSTA1P08263 222 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 GKN3PP0CG01 181 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 BMP2P12643 396 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 RPS2P15880 293 aaKnown RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 TNFRSF1AP19438 455 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 RPS4Y1P22090 263 aaKnown RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ARRB2P32121 409 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 MSX2P35548 267 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 HPCAL1P37235 193 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 KIR2DS4P43632 304 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 SERPINB9P50453 376 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 COX10Q12887 443 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 PTGR1Q14914 329 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 TBC1D28Q2M2D7 210 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 TM4SF20Q53R12 229 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 XKR7Q5GH72 579 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 SPATA46Q5T0L3 261 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 MRPL2Q5T653 305 aaKnown RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ATAD3BQ5T9A4 648 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 C11orf88Q6PI97 169 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ZDHHC24Q6UX98 284 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 WDR88Q6ZMY6 472 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF841Q6ZN19 808 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 RNF165Q6ZSG1 346 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 FRMD7Q6ZUT3 714 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 H1FNTQ75WM6 255 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 RIMKLAQ8IXN7 391 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 CADM2Q8N3J6 435 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 OR1J2Q8NGS2 313 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 PPP1R35Q8TAP8 253 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF417Q8TAU3 575 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 R3HDM4Q96D70 268 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC35G5Q96KT7 338 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF587Q96SQ5 575 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 SH3GL3Q99963 347 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 FUT8Q9BYC5 575 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ULBP2Q9BZM5 246 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 OR2J1Q9GZK6 312 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC38A1Q9H2H9 487 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 MTHFD2LQ9H903 347 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 A4GALTQ9NPC4 353 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 B3GAT2Q9NPZ5 323 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 ATAD3AQ9NVI7 634 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 NKX1-2Q9UD57 310 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 MIOXQ9UGB7 285 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 PPP1R3CQ9UQK1 317 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 HERC2O95714 4834 aa6.05□□□□□ -1.44
SPTLC1-205ENST00000477888 RNF103-CHMP3A0A140T963 221 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 CDHR4A6H8M9 788 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF879B4DU55 563 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 AIM2O14862 343 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 RAD51CO43502 376 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 LYPLA1O75608 230 aaPredicted RBP6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TOX4O94842 621 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF205O95201 554 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 FSTL3O95633 263 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 PTHP01270 115 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 INHBAP08476 426 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 FAM153BP0C7A2 387 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 LINC00032P0C843 101 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 PRG2P13727 222 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 IL7RP16871 459 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC6A2P23975 617 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 GRPRP30550 384 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SOAT1P35610 550 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 WNT5AP41221 380 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 NAA20P61599 178 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 COPZ1P61923 177 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 CAV1Q03135 178 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 NSUN5P1Q3KNT7 163 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms