RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 OR52E2Q8NGJ4 325 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 OR6X1Q8NH79 312 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 DIRC2Q96SL1 478 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 NUF2Q9BZD4 464 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 TPT1P8Q9HAU6 139 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 DCAF16Q9NXF7 216 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 RAP2CQ9Y3L5 183 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 SOX21Q9Y651 276 aaPredicted RBP17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 IQCMA0A1B0GVH7 501 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 TLDC2A0PJX2 215 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 LRRN3E7EW58 273 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 DHHO43323 396 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 CD55P08174 381 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 SBK2P0C263 348 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 PRKAR1BP31321 381 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 MPV17P39210 176 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 PLP2Q04941 152 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 PAX8Q06710 450 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 NRN1LQ496H8 165 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 FBLN7Q53RD9 439 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 OLFML2AQ68BL7 652 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 LRFN4Q6PJG9 635 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC16A14Q7RTX9 510 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 BBS10Q8TAM1 723 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 GEMIN6Q8WXD5 167 aaKnown RBP17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC47A1Q96FL8 570 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 RSPO3Q9BXY4 272 aaPredicted RBP17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 MEAF6Q9HAF1 191 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 CYSLTR2Q9NS75 346 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 CGGBP1Q9UFW8 167 aaPredicted RBP17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 OR5V1Q9UGF6 321 aa17.05■□□□□ 0.32
PDLIM1-202ENST00000477757 IGHV3OR16-10A0A075B7F0 116 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 MDFIC2A0A1B0GVS7 189 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 FAM181BA6NEQ2 426 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 F5H0A9 414 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 HOXA3O43365 443 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 NDUFA7O95182 113 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 SERPINE1P05121 402 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZCCHC18P0CG32 403 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 RPL14P50914 215 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ABCE1P61221 599 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 HNRNPA0Q13151 305 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZNF718Q3SXZ3 478 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 SPATA46Q5T0L3 261 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 JAZF1Q86VZ6 243 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 NUDCD3Q8IVD9 361 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZNF101Q8IZC7 436 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 BHLHE22Q8NFJ8 381 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 UBE2FQ969M7 185 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZNF566Q969W8 418 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 VPS33AQ96AX1 596 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 UPRTQ96BW1 309 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 MARS2Q96GW9 593 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 PKNOX2Q96KN3 472 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZBTB18Q99592 522 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 RBM4BQ9BQ04 359 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 C20orf27Q9GZN8 174 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 A4GALTQ9NPC4 353 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 EGFL7Q9UHF1 273 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 LGALS13Q9UHV8 139 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 ZDHHC8Q9ULC8 765 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 RYR3Q15413 4870 aa17.04■□□□□ 0.32
PDLIM1-202ENST00000477757 A0A0B4J2E0 115 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 A0A1B0GX12 115 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 C11orf98E9PRG8 122 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 ALX3O95076 343 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 MMP7P09237 267 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 CD80P33681 288 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 APLNRP35414 380 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 LIPAP38571 399 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 GTDC1Q4AE62 458 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 ESCO2Q56NI9 601 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 ZMAT1Q5H9K5 638 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 MBNL2Q5VZF2 373 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC35D2Q76EJ3 337 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 C1QL4Q86Z23 238 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 C10orf53Q8N6V4 93 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 EIF1ADQ8N9N8 165 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 OR5J2Q8NH18 312 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC25A44Q96H78 314 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 SORT1Q99523 831 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 TMEM43Q9BTV4 400 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 PRDM13Q9H4Q3 707 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 TMEM106BQ9NUM4 274 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 SELENONQ9NZV5 590 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 HAO1Q9UJM8 370 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 TRIM33Q9UPN9 1127 aa17.03■□□□□ 0.32
PDLIM1-202ENST00000477757 TRAV40A0A0B4J280 105 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 ANP32DO95626 131 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 MT-ATP6P00846 226 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 NGFP01138 241 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 NUDT7P0C024 238 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 PGA4P0DJD7 388 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 PGA3P0DJD8 388 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 ADORA3P0DMS8 318 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 WNT5AP41221 380 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 NCALDP61601 193 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms