RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SH3GL3Q99963 347 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 ALG12Q9BV10 488 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 NMNAT1Q9HAN9 279 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF346Q9UL40 294 aaKnown RBP18.78■□□□□ 0.6
COL9A3-211ENST00000477612 SAMD4AQ9UPU9 718 aaKnown RBP18.78■□□□□ 0.6
COL9A3-211ENST00000477612 SPEF1Q9Y4P9 236 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 FKBP7Q9Y680 259 aa18.78■□□□□ 0.6
COL9A3-211ENST00000477612 SAGP10523 405 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-211ENST00000477612 NR2C1P13056 603 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 RHCEP18577 417 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 RPL27P61353 136 aaKnown RBP18.77■□□□□ 0.6
COL9A3-211ENST00000477612 MRPS34P82930 218 aaKnown RBP18.77■□□□□ 0.6
COL9A3-211ENST00000477612 MYBPC1Q00872 1141 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 IQCCQ4KMZ1 466 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 KRT80Q6KB66 452 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 CYP4Z1Q86W10 505 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 PGAM4Q8N0Y7 254 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 ANKS4BQ8N8V4 417 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 RBM15BQ8NDT2 890 aaKnown RBP18.77■□□□□ 0.6
COL9A3-211ENST00000477612 OR4K5Q8NGD3 323 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 SLC7A13Q8TCU3 470 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 LRRC37BQ96QE4 947 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 TNFRSF13CQ96RJ3 184 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 MYOZ1Q9NP98 299 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-211ENST00000477612 ADA2Q9NZK5 511 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 NDUFAF4Q9P032 175 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 CD300AQ9UGN4 299 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 CMAHPQ9Y471 501 aa18.77■□□□□ 0.6
COL9A3-211ENST00000477612 A0A1W2PRQ8 180 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 EFCAB9A8MZ26 197 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 hCG_2039718K7EN88 272 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 IGFBP1P08833 259 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-211ENST00000477612 MMP7P09237 267 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-211ENST00000477612 CTXN1P60606 82 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 DGCR6Q14129 220 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 SLC36A2Q495M3 483 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 FAM205BPQ63HN1 556 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 SLC25A47Q6Q0C1 308 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 TBPL2Q6SJ96 375 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 ZNF730Q6ZMV8 503 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 SLC16A14Q7RTX9 510 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 OAFQ86UD1 273 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 CDK20Q8IZL9 346 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 MRPL24Q96A35 216 aaKnown RBP18.76■□□□□ 0.59
COL9A3-211ENST00000477612 C1orf198Q9H425 327 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 SIAEQ9HAT2 523 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 TAGLN3Q9UI15 199 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 UGT2A1Q9Y4X1 527 aa18.76■□□□□ 0.59
COL9A3-211ENST00000477612 TRAV27A0A087WT01 109 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 IGKV1D-43A0A0B4J1Z2 117 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 VWC2LB2RUY7 222 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 NDUFS8O00217 210 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 CDC42EP2O14613 210 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 CD5LO43866 347 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 DCTN3O75935 186 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 LY6HO94772 140 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 MSMPQ1L6U9 139 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 THEM4Q5T1C6 240 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 TMEM53Q6P2H8 277 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 RNF148Q8N7C7 305 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 OR51A7Q8NH64 312 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 ZNF519Q8TB69 540 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 NABP1Q96AH0 204 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 DHRS1Q96LJ7 313 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 VRK1Q99986 396 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-211ENST00000477612 RAB1BQ9H0U4 201 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 ARL8BQ9NVJ2 186 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 SLC7A8Q9UHI5 535 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 TMEM5Q9Y2B1 443 aa18.75■□□□□ 0.59
COL9A3-211ENST00000477612 INAFM1C9JVW0 142 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 TLX2O43763 284 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 GMNNO75496 209 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SLC2A10O95528 541 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 PTHP01270 115 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SEMG1P04279 462 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 H1F0P07305 194 aaKnown RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 PDLIM4P50479 330 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 PPP2R2BQ00005 443 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SPATS1Q496A3 300 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SAMD4BQ5PRF9 694 aaKnown RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 FOXL2NBQ6ZUU3 175 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 RRM2BQ7LG56 351 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 MEX3DQ86XN8 651 aaKnown RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SVOPLQ8N434 492 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 NEU4Q8WWR8 484 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 TSPAN32Q96QS1 320 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 RBP7Q96R05 134 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 MAGEL2Q9UJ55 1249 aa18.74■□□□□ 0.59
COL9A3-211ENST00000477612 FAM32AQ9Y421 112 aaKnown RBP18.74■□□□□ 0.59
COL9A3-211ENST00000477612 SLC22A23A1A5C7 686 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 A6NIZ1 184 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 GPRIN2O60269 458 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 PTP4A3O75365 173 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 SNAP29O95721 258 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 RAP1BP61224 184 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 RPS23P62266 143 aaKnown RBP18.73■□□□□ 0.59
COL9A3-211ENST00000477612 RAP1AP62834 184 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 VLDLRP98155 873 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 GALK2Q01415 458 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 FMODQ06828 376 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms