RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LAMA5O15230 3695 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 HERC1Q15751 4861 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ZMYM2Q9UBW7 1377 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NCANO14594 1321 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CUBNO60494 3623 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 A0A087X1B8 175 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 IGHV4-28A0A0C4DH34 117 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 hCG_38984A0A1B0GV85 526 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 IQCMA0A1B0GVH7 501 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PRSS37A4D1T9 235 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 GRID2IPA4D2P6 1211 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF503-AS2A6NEH8 195 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PGRMC1O00264 195 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SULT1C2O00338 296 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SLC1A7O00341 560 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 B4GALT5O43286 388 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SGCEO43556 437 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 GATCO43716 136 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CXCL13O43927 109 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RAMP1O60894 148 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PSIP1O75475 530 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 KHDRBS3O75525 346 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CIAO1O76071 339 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 GJB5O95377 273 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TNFAIP8O95379 198 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 BRI3O95415 125 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TSPAN13O95857 204 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CD160O95971 181 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PEX11BO96011 259 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TNNC2P02585 160 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 FGGP02679 453 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SP1P08047 785 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HOXC6P09630 235 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CD3GP09693 182 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 FAM157CP0CG43 387 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RD3LP0DJH9 198 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 GIMD1P0DJR0 217 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HSPD1P10809 573 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 MYOD1P15172 320 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NQO1P15559 274 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF7P17097 686 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PI3P19957 117 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CFL1P23528 166 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CXCR2P25025 360 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ITGB7P26010 798 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 IL12AP29459 219 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HOXD3P31249 432 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ID1P41134 155 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ELK3P41970 407 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RBM34P42696 430 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RANBP1P43487 201 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 YAP1P46937 504 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 QARSP47897 775 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZFP36L2P47974 494 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PRLHRP49683 370 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RPL14P50914 215 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NKX2-5P52952 324 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SLURP1P55000 103 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 BACE1P56817 501 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NUP107P57740 925 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR1D5P58170 312 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 DCDC1P59894 354 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RPL27P61353 136 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ERVK11-1P61568 191 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 DGCR2P98153 550 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CYP24A1Q07973 514 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TRAF2Q12933 501 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SRSF9Q13242 221 aaKnown RBP eCLIP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF268Q14587 947 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNHIT3Q15649 155 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ALX1Q15699 326 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 POU2AF1Q16633 256 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 DGUOKQ16854 277 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 KCTD19Q17RG1 926 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RPEL1Q2QD12 228 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF284Q2VY69 593 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 GTDC1Q4AE62 458 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 VWA2Q5GFL6 755 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PAPPA-AS1Q5QFB9 102 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RBM48Q5RL73 367 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PPM1LQ5SGD2 360 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 DCAF12Q5T6F0 453 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ATP1A1-AS1Q5TC04 95 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OGFRL1Q5TC84 451 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OTUD1Q5VV17 481 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SUMO4Q6EEV6 95 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR4C11Q6IEV9 310 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR8G2PQ6IF36 304 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SPOPLQ6IQ16 392 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF425Q6IV72 752 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 FAHD1Q6P587 224 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 EMBQ6PCB8 327 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RHBDF2Q6PJF5 856 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 C19orf48Q6RUI8 117 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HACD2Q6Y1H2 254 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NUFIP2Q7Z417 695 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CEACAM19Q7Z692 300 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 UNC93AQ86WB7 457 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF677Q86XU0 584 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms