RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 B3GNT6Q6ZMB0 384 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 KCTD8Q6ZWB6 473 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SHFQ7M4L6 423 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC16A9Q7RTY1 509 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 TUSC5Q8IXB3 177 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 Q8NA96 180 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 OR52I1Q8NGK6 324 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 CPT1CQ8TCG5 803 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SNX33Q8WV41 574 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 PTP4A1Q93096 173 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 MCHR2Q969V1 340 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 WBP1Q96G27 269 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 TSSK2Q96PF2 358 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 TBX5Q99593 518 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 HCAR1Q9BXC0 346 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 NMNAT2Q9BZQ4 307 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 DUSP21Q9H596 190 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 C12orf49Q9H741 205 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 BCO1Q9HAY6 547 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 HAO2Q9NYQ3 351 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 CLCF1Q9UBD9 225 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 COA3Q9Y2R0 106 aaPredicted RBP9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 NCOR2Q9Y618 2525 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 CCDC182A6NF36 153 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 CCDC160A6NGH7 325 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 TVP23AA6NH52 213 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 DHHO43323 396 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC19A2O60779 497 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SBK2P0C263 348 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 OR2T7P0C7T2 308 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 HSMCR30P0CW71 290 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 CTLA4P16410 223 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 PSMB9P28065 219 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 AGTR1P30556 359 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 HOXC12P31275 282 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 RPL5P46777 297 aaKnown RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ENTPD1P49961 510 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 RUNX1T1Q06455 604 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 NFATC3Q12968 1075 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 TBCEQ15813 527 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SGCAQ16586 387 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF362Q5T0B9 420 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC18B1Q6NT16 456 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 KCTD18Q6PI47 426 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 RPTNQ6XPR3 784 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 GPR141Q7Z602 305 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ZBTB46Q86UZ6 589 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 C20orf196Q8IYI0 205 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 GCNT2Q8N0V5 402 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 OR6V1Q8N148 313 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 OR4F15Q8NGB8 312 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 OR2T27Q8NH04 317 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ASB17Q8WXJ9 295 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM54Q969K7 222 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ALKBH3Q96Q83 286 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SLX1AQ9BQ83 275 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 TTYH2Q9BSA4 534 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 MRPL13Q9BYD1 178 aaKnown RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 YIPF3Q9GZM5 350 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 NELFAQ9H3P2 528 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 WDR76Q9H967 626 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 FGF20Q9NP95 211 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 MRPS18AQ9NVS2 196 aaKnown RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 KCNG2Q9UJ96 466 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 SH3BGRL2Q9UJC5 107 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 IKZF2Q9UKS7 526 aa9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 EXOGQ9Y2C4 368 aaKnown RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 ANKRD11Q6UB99 2663 aaPredicted RBP9.11□□□□□ -0.95
PRPF38A-202ENST00000474048 IGLV1-36A0A0B4J1U3 117 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 SELENOFO60613 162 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 SS18L1O75177 396 aaPredicted RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TGM6O95932 706 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 HRGP04196 525 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 KRT8P05787 483 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 CRHP06850 196 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TACSTD2P09758 323 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TMIGD3P0DMS9 266 aaPredicted RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 NPR2P20594 1047 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 MSR1P21757 451 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TTKP33981 857 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC15A1P46059 708 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TDGF1P3P51864 188 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 SH3BGRP55822 239 aaPredicted RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 WNT4P56705 351 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ROR2Q01974 943 aaKnown RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TGFBR3Q03167 851 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 PIGFQ07326 219 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 EIF2B1Q14232 305 aaKnown RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TAF13Q15543 124 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 RIPPLY2Q5TAB7 128 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF324BQ6AW86 544 aaPredicted RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM211Q6ICI0 200 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 LAIR2Q6ISS4 152 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 B3GLCTQ6Y288 498 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 PLEKHG7Q6ZR37 379 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 FAM214BQ7L5A3 538 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms