RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RERGLQ9H628 205 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 IL20Q9NYY1 176 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 CENPEQ02224 2701 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 CELSR2Q9HCU4 2923 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 UNC79Q9P2D8 2635 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 A0A1W2PPL8 197 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SLC22A23A1A5C7 686 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 ARPC3O15145 178 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 IDH3BO43837 385 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 TXNDC12O95881 172 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 RENP00797 406 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 CD3EP07766 207 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 OR8G3PP0DMU2 310 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 CD79AP11912 226 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 POU1F1P28069 291 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SLC36A3Q495N2 470 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SLC35F1Q5T1Q4 408 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 NCMAPQ5T1S8 102 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 C10orf128Q5T292 105 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 LEG1Q6P5S2 330 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 CDC20BQ86Y33 519 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 OR4K13Q8NH42 304 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 STMN2Q93045 179 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 NMD3Q96D46 503 aaKnown RBP10.85□□□□□ -0.67
DDX56-209ENST00000473924 CENPNQ96H22 339 aaPredicted RBP10.85□□□□□ -0.67
DDX56-209ENST00000473924 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 PLA2G12AQ9BZM1 189 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SYT4Q9H2B2 425 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SEMA6AQ9H2E6 1030 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 KCNN2Q9H2S1 579 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 SEC61A2Q9H9S3 476 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 MOV10Q9HCE1 1003 aaKnown RBP10.85□□□□□ -0.67
DDX56-209ENST00000473924 NPAP1Q9NZP6 1156 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 RNF115Q9Y4L5 304 aa10.85□□□□□ -0.67
DDX56-209ENST00000473924 IGKV1D-43A0A0B4J1Z2 117 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 DPRXA6NFQ7 191 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SLC16A7O60669 478 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 UBL3O95164 117 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 HLA-HP01893 362 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 IGFBP1P08833 259 aaPredicted RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 HIST1H1CP16403 213 aaKnown RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 NPR2P20594 1047 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 PTAFRP25105 342 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 CDAP32320 146 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 CDKN2AP42771 156 aaKnown RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 KRTAP10-9P60411 292 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 PIGFQ07326 219 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 NPRL3Q12980 569 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SGCAQ16586 387 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 GSG1Q2KHT4 349 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 DNM1P34Q6PK57 102 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SLC25A47Q6Q0C1 308 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SEZ6L2Q6UXD5 910 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 PTCHD4Q6ZW05 846 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 DEPDC4Q8N2C3 294 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 SVOPLQ8N434 492 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 LRRC18Q8N456 261 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 ICA1LQ8NDH6 482 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 OR2T33Q8NG76 320 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 OR52E2Q8NGJ4 325 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 OR8D4Q8NGM9 314 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 DNAJC9Q8WXX5 260 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 HTRA1Q92743 480 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 SH3GL3Q99963 347 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 RNF121Q9H920 327 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
DDX56-209ENST00000473924 BAIAP2Q9UQB8 552 aa10.84□□□□□ -0.67
DDX56-209ENST00000473924 ANKRD65E5RJM6 399 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 H3BNX3 289 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 BHLHE40O14503 412 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 ABCD4O14678 606 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 MGRN1O60291 552 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 KHDRBS3O75525 346 aaKnown RBP10.83□□□□□ -0.68
DDX56-209ENST00000473924 RAB36O95755 333 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 OSMP13725 252 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 CBR1P16152 277 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 CD40P25942 277 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 CRABP1P29762 137 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 ARR3P36575 388 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 PTDSS1P48651 473 aaKnown RBP10.83□□□□□ -0.68
DDX56-209ENST00000473924 CENPAP49450 140 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 RAB1AP62820 205 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
DDX56-209ENST00000473924 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX56-209ENST00000473924 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 SLC22A25Q6T423 547 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 ZNF704Q6ZNC4 412 aaPredicted RBP10.83□□□□□ -0.68
DDX56-209ENST00000473924 SLC16A14Q7RTX9 510 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 MDP1Q86V88 176 aa10.83□□□□□ -0.68
DDX56-209ENST00000473924 SDR9C7Q8NEX9 313 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms