RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CHRNA9Q9UGM1 479 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ASF1AQ9Y294 204 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RAI2Q9Y5P3 530 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM183AA6NL82 134 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 F5H0A9 414 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 F8VVB4 439 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 F8VWA3 439 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BKO60814 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BJP06899 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ERCC1P07992 297 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CD14P08571 375 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SNRNP70P08621 437 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 LAMP1P11279 417 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BOP23527 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BBP33778 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CAPZBP47756 277 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HMGA2P52926 109 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BDP58876 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 WDR5P61964 334 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BCP62807 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ARHGAP1Q07960 439 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MRPL49Q13405 166 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 GINS1Q14691 196 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MEF2DQ14814 521 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PAFAH1B3Q15102 231 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PCOLCEQ15113 449 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 TEAD2Q15562 447 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST2H2BEQ16778 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 GOLGA7BQ2TAP0 167 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SPANXN4Q5MJ08 99 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HENMT1Q5T8I9 393 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SDHAF4Q5VUM1 108 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 WSCD1Q658N2 575 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 OR6B2Q6IFH4 312 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC35D2Q76EJ3 337 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CCDC107Q8WV48 283 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BHQ93079 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 NT5C3BQ969T7 300 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 C12orf42Q96LP6 360 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 TXN2Q99757 166 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BNQ99877 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BMQ99879 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST1H2BLQ99880 126 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 NUDT16L1Q9BRJ7 211 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 DOHHQ9BU89 302 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MAGEB5Q9BZ81 275 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 POLR3FQ9H1D9 316 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RGCCQ9H4X1 137 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SEMA4BQ9NPR2 832 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 THSD1Q9NS62 852 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 TREX1Q9NSU2 369 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 GSKIPQ9P0R6 139 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ABRACLQ9P1F3 81 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 OR52A1Q9UKL2 312 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RNF24Q9Y225 148 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RCE1Q9Y256 329 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RASD1Q9Y272 281 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ADAM18Q9Y3Q7 739 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 WIF1Q9Y5W5 379 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PLXNB2O15031 1838 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 DOCK5Q9H7D0 1870 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 ANKRD61A6NGH8 418 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 A6NNC1 897 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM157AC9JC47 383 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SYT7O43581 403 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 NARSO43776 548 aaKnown RBP4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 AIFM1O95831 613 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 GASTP01350 101 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 IFNA21P01568 189 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 NBEAP1P0C6P0 100 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 IRF2P14316 349 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SDC1P18827 310 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 BRS3P32247 399 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 CCR8P51685 355 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC37A1P57057 533 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SPIBQ01892 262 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 GUK1Q16774 197 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 COL5A1-AS1Q5SY13 56 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 ADNP2Q6IQ32 1131 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 GRHL2Q6ISB3 625 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SFXN4Q6P4A7 337 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 DHRS11Q6UWP2 260 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 PRSS57Q6UWY2 283 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC36A1Q7Z2H8 476 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 DNAJB7Q7Z6W7 309 aaPredicted RBP4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 MYPOPQ86VE0 399 aaPredicted RBP4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 TRAPPC5Q8IUR0 188 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 APCDD1Q8J025 514 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2C3Q8N628 320 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 NAXEQ8NCW5 288 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 GMCL1P1Q8NEA9 526 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 STAG3L4Q8TBR4 150 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 ORAOV1Q8WV07 137 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 TRAPPC12Q8WVT3 735 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 LIPHQ8WWY8 451 aa4.65□□□□□ -1.66
TMEM39A-206ENST00000473684 THAP4Q8WY91 577 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms