RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
TPM3-216ENST00000473036 NDEL1Q9GZM8 345 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 SEC61A2Q9H9S3 476 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 GLTPQ9NZD2 209 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 MGAT4BQ9UQ53 548 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ORC6Q9Y5N6 252 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 U3KQV3 271 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 DSCAMO60469 2012 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 A0A1W2PRG6 482 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZNF99A8MXY4 864 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 AKAP8O43823 692 aaKnown RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 OR10H3O60404 316 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 SLC2A10O95528 541 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 GASTP01350 101 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 TP53P04637 393 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 IGFBP1P08833 259 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 QDPRP09417 244 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ACADSP16219 412 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZNF83P51522 516 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZNF133P52736 654 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 RPL27P61353 136 aaKnown RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 FMODQ06828 376 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 TOP3AQ13472 1001 aaPredicted RBP11.44□□□□□ -0.58
TPM3-216ENST00000473036 RFX4Q33E94 735 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 HMBOX1Q6NT76 420 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZNF627Q7L945 461 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 NOXO1Q8NFA2 376 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 OR6N1Q8NGY5 312 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ZNF566Q969W8 418 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 Q96M85 177 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 KATNB1Q9BVA0 655 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 NTN4Q9HB63 628 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 B3GNT2Q9NY97 397 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 UGT2A1Q9Y4X1 527 aa11.44□□□□□ -0.58
TPM3-216ENST00000473036 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 UNC119BA6NIH7 251 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 H0YJX3 145 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 H7C1C5 153 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 RAF1P04049 648 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 CD14P08571 375 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 CELA3BP08861 270 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 B4GALT1P15291 398 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 FPR3P25089 353 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 LCN6P62502 163 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 TRIP10Q15642 601 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 SNCBQ16143 134 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 MESTQ5EB52 335 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 RPL13AP3Q6NVV1 102 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 ANKRD16Q6P6B7 361 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 SLC25A47Q6Q0C1 308 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 PAMR1Q6UXH9 720 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 ZNF704Q6ZNC4 412 aaPredicted RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 AMIGO2Q86SJ2 522 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 HS3ST5Q8IZT8 346 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 C17orf78Q8N4C9 275 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 ICA1LQ8NDH6 482 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 KBTBD8Q8NFY9 601 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 MAGEE2Q8TD90 523 aaPredicted RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 GNPDA2Q8TDQ7 276 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 RASD2Q96D21 266 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 C18orf12Q96KH6 178 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 ZNF75AQ96N20 296 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 RDH12Q96NR8 316 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 GPX7Q96SL4 187 aaPredicted RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 USB1Q9BQ65 265 aaKnown RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 PLA2G12AQ9BZM1 189 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 ULBP2Q9BZM5 246 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 NRIP3Q9NQ35 241 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 PDP1Q9P0J1 537 aaPredicted RBP11.43□□□□□ -0.58
TPM3-216ENST00000473036 KIF17Q9P2E2 1029 aa11.43□□□□□ -0.58
TPM3-216ENST00000473036 IGHV1-18A0A0C4DH31 117 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 DHHO43323 396 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 NDUFB2O95178 105 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 IGHG1P01857 330 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 SCG5P05408 212 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 PATE4P0C8F1 98 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 CD40P25942 277 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 ACVR1BP36896 505 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 DAP3P51398 398 aaKnown RBP11.42□□□□□ -0.58
TPM3-216ENST00000473036 RAD23AP54725 363 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 SH3BGRP55822 239 aaPredicted RBP11.42□□□□□ -0.58
TPM3-216ENST00000473036 PRPS1P60891 318 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 TGFBR3Q03167 851 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 TSPAN31Q12999 210 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 ETFDHQ16134 617 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 DEFB113Q30KQ7 82 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 C10orf128Q5T292 105 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 ADAM5Q6NVV9 412 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 CD300LDQ6UXZ3 194 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 B3GLCTQ6Y288 498 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 PTCHD4Q6ZW05 846 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 SKA3Q8IX90 412 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 ARIH2OSQ8N7S6 290 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 ATG16L2Q8NAA4 619 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 OR10G2Q8NGC3 310 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms