RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ASB10Q8WXI3 467 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 C1orf159Q96HA4 380 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF347Q96SE7 839 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 INIPQ9NRY2 104 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 GID8Q9NWU2 228 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 MYEF2Q9P2K5 600 aaKnown RBP13.13□□□□□ -0.31
VTI1A-203ENST00000472892 FBN3Q75N90 2809 aa13.13□□□□□ -0.31
VTI1A-203ENST00000472892 FAM220BPB1ANY3 271 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-203ENST00000472892 TRMUO75648 421 aaKnown RBP13.12□□□□□ -0.31
VTI1A-203ENST00000472892 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-203ENST00000472892 COL8A2P25067 703 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 ALDH3B1P43353 468 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 DAP3P51398 398 aaKnown RBP13.12□□□□□ -0.31
VTI1A-203ENST00000472892 SELENOWP63302 87 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 TRIP10Q15642 601 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 C10orf128Q5T292 105 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 TMEM53Q6P2H8 277 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 SLC16A14Q7RTX9 510 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-203ENST00000472892 PCYOX1LQ8NBM8 494 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 SNX18Q96RF0 628 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 RNF121Q9H920 327 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 DUSP13Q9UII6 198 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 FZR1Q9UM11 496 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 MED31Q9Y3C7 131 aa13.12□□□□□ -0.31
VTI1A-203ENST00000472892 HTR3EA5X5Y0 456 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 NPIPB13A6NJU9 1138 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 NPIPB4C9JG80 1138 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 MCIDASD6RGH6 385 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 SNAP29O95721 258 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 PTHP01270 115 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 HPXP02790 462 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 MMP7P09237 267 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 CCL2P13500 99 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF250P15622 560 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 HNF1AP20823 631 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 APEX1P27695 318 aaKnown RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF84P51523 738 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 MRPS11P82912 194 aaKnown RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 MAD2L1BPQ15013 274 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 RGS7BPQ6MZT1 257 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 UGT2A3Q6UWM9 527 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 IL17RELQ6ZVW7 336 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 SYT14Q8NB59 555 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 NOXO1Q8NFA2 376 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 OR2T12Q8NG77 320 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 OR1J2Q8NGS2 313 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 RDH5Q92781 318 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
VTI1A-203ENST00000472892 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
VTI1A-203ENST00000472892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■□□□□ 8.2
VTI1A-203ENST00000472892 IGLV3-9A0A075B6K5 115 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 SLC22A2O15244 555 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 NAT2P11245 290 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 ACHEP22303 614 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 RAD52P43351 418 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 CDH15P55291 814 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 UCP2P55851 309 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 TMEM33P57088 247 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
VTI1A-203ENST00000472892 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 MICU2Q8IYU8 434 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 RBM15BQ8NDT2 890 aaKnown RBP13.1□□□□□ -0.31
VTI1A-203ENST00000472892 ZNF519Q8TB69 540 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 TPD52L3Q96J77 140 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
VTI1A-203ENST00000472892 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 HIF3AQ9Y2N7 669 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
VTI1A-203ENST00000472892 IQCMA0A1B0GVH7 501 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 A0A1W2PPW3 197 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 ELOVL7A1L3X0 281 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 CLPTM1O96005 669 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 SELENOVP59797 346 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 PLP2Q04941 152 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 TAF11Q15544 211 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 TBC1D28Q2M2D7 210 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 KRTAP24-1Q3LI83 254 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-203ENST00000472892 LRRC18Q8N456 261 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 CPEB3Q8NE35 698 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms