RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FKBP7Q9Y680 259 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 ARHGAP32A7KAX9 2087 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 VWFP04275 2813 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 SYNGR3O43761 229 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 RP2O75695 350 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 OR7A10O76100 309 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 MT-ATP6P00846 226 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 NGFP01138 241 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 IFNA2P01563 188 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 CSF3P09919 207 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 TSPAN19P0C672 248 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 UMPSP11172 480 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 MPV17P39210 176 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 CCL8P80075 99 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 CYBRD1Q53TN4 286 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 ARMC4Q5T2S8 1044 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 REP15Q6BDI9 236 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 UGT2A3Q6UWM9 527 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 C5orf46Q6UWT4 87 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 PIWIL3Q7Z3Z3 882 aaKnown RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 VTCN1Q7Z7D3 282 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 PATL1Q86TB9 770 aaKnown RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 SNX32Q86XE0 403 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 ZNF101Q8IZC7 436 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 SLC30A7Q8NEW0 376 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 AKR7LQ8NHP1 331 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 ASB10Q8WXI3 467 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 NSMAFQ92636 917 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 ZNF566Q969W8 418 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 NABP1Q96AH0 204 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 SLC25A44Q96H78 314 aaPredicted RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 ZNF317Q96PQ6 595 aaPredicted RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 SEPHS2Q99611 448 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 PCDHAC1Q9H158 963 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 ZNF275Q9NSD4 429 aaPredicted RBP6.9□□□□□ -1.3
USP48-207ENST00000471752 MAN2C1Q9NTJ4 1040 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 TAAR3PQ9P1P4 343 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 ZNF229Q9UJW7 825 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 A4GNTQ9UNA3 340 aa6.9□□□□□ -1.3
USP48-207ENST00000471752 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
USP48-207ENST00000471752 H7C1C5 153 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 OR6A2O95222 327 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 VENTXO95231 258 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 RAB36O95755 333 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 BCL10O95999 233 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 MT-ND1P03886 318 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 OR8G3PP0DMU2 310 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 CDH15P55291 814 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 LCN6P62502 163 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 GUCY1A3Q02108 690 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 MVKQ03426 396 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 TOP3AQ13472 1001 aaPredicted RBP6.89□□□□□ -1.31
USP48-207ENST00000471752 SGCAQ16586 387 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 PABPC1L2AQ5JQF8 200 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 THEM4Q5T1C6 240 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 C1QTNF12Q5T7M4 302 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
USP48-207ENST00000471752 SLC25A47Q6Q0C1 308 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 RINLQ6ZS11 566 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 HDXQ7Z353 690 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 NANOGNBQ7Z5D8 188 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 CCDC36Q8IYA8 594 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 LINC01356Q8N9X3 169 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 LRRC75AQ8NAA5 344 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 ICA1LQ8NDH6 482 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 IL17RDQ8NFM7 739 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 SLC26A7Q8TE54 656 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 TMEM239Q8WW34 195 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 WNT5BQ9H1J7 359 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 RABEP2Q9H5N1 569 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 RNF121Q9H920 327 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 B3GAT2Q9NPZ5 323 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 TMEFF2Q9UIK5 374 aaPredicted RBP6.89□□□□□ -1.31
USP48-207ENST00000471752 ZNF346Q9UL40 294 aaKnown RBP6.89□□□□□ -1.31
USP48-207ENST00000471752 CORO2BQ9UQ03 480 aa6.89□□□□□ -1.31
USP48-207ENST00000471752 TRAV27A0A087WT01 109 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 M0R233 179 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 CDC42EP2O14613 210 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 MRASO14807 208 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 PPIHO43447 177 aaKnown RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 UBL3O95164 117 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 GPANK1O95872 356 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 HIST1H2ABP04908 130 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 LCKP06239 509 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ZNF250P15622 560 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ACADSP16219 412 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ZNF32P17041 273 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ITGA2P17301 1181 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ADRA2CP18825 462 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 CCNOP22674 350 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 LAP3P28838 519 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 KDELR2P33947 212 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 EVX1P49640 407 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ERFP50548 548 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ZNF133P52736 654 aaPredicted RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 CHN2P52757 468 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms