RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SORT1Q99523 831 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 CCT7Q99832 543 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SIKE1Q9BRV8 207 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ATG101Q9BSB4 218 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 NUSAP1Q9BXS6 441 aaKnown RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ATG10Q9H0Y0 220 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 UCK1Q9HA47 277 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SLCO1B3Q9NPD5 702 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 DEPPQ9NTK1 212 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 FGFR1OP2Q9NVK5 253 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 PCTPQ9UKL6 214 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 NSG2Q9Y328 171 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 NAALAD2Q9Y3Q0 740 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 KLK4Q9Y5K2 254 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LAMA1P25391 3075 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 A0A0A6YYC8 382 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 TRPC5OSA6NMA1 111 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 I3L1I5 382 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 UBFD1O14562 309 aaKnown RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 OR7A17O14581 309 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 AZIN1O14977 448 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ANGPT2O15123 496 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 HDAC3O15379 428 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ZW10O43264 779 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 NUDT21O43809 227 aaKnown RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 LYPLA1O75608 230 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CLDN9O95484 217 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 TGFAP01135 160 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CHRNGP07510 517 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 RETP07949 1114 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 C1GALT1C1LP0DN25 315 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 KLK2P20151 261 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CXCR2P25025 360 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CCNG1P51959 295 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 BTG1P62324 171 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 GABPB1Q06547 395 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 PRDX1Q06830 199 aaKnown RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 DEFB133Q30KQ1 61 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 C18orf21Q32NC0 220 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 MUC21Q5SSG8 566 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 HIST2H2AA3Q6FI13 130 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 BTNL8Q6UX41 500 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ISLR2Q6UXK2 745 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 MBOAT1Q6ZNC8 495 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 RNF165Q6ZSG1 346 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 TMEM26Q6ZUK4 368 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
CCDC39-202ENST00000471307 C17orf64Q86WR6 236 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ARL14Q8N4G2 192 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 CD177Q8N6Q3 437 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SNX31Q8N9S9 440 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 OR4E2Q8NGC2 313 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 OR52E1Q8NGJ3 308 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 MRAPQ8TCY5 172 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SLC37A2Q8TED4 501 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SAP25Q8TEE9 199 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ITLN1Q8WWA0 313 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 TMEM131Q92545 1883 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 ESAMQ96AP7 390 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 WDR34Q96EX3 536 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 MED8Q96G25 268 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SAMD8Q96LT4 415 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 OR4K3Q96R72 315 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 C20orf27Q9GZN8 174 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SRMSQ9H3Y6 488 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 EHD1Q9H4M9 534 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 HEATR5BQ9P2D3 2071 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SNX6Q9UNH7 406 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 GPR132Q9UNW8 380 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 SLC22A14Q9Y267 594 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 U3KQV3 271 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 WDFY4Q6ZS81 3184 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 VPS13AQ96RL7 3174 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 FRYLO94915 3013 aa4.08□□□□□ -1.76
CCDC39-202ENST00000471307 UNC13CQ8NB66 2214 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 A0A1W2PPV9 198 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR6C74A6NCV1 312 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 A8MU76 341 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 C2orf74A8MZ97 194 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 PRSS46E5RG02 174 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 H0YIV9 168 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 NDUFAB1O14561 156 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SDC3O75056 442 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 LRP3O75074 770 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SCGB2A1O75556 95 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR4F21O95013 312 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SNX4O95219 450 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ANGPTL1O95841 491 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 KRT6AP02538 564 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 KRT6BP04259 564 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF806P0C7X5 589 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 GIMD1P0DJR0 217 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 LBPP18428 481 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TSPAN8P19075 237 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 CMPK1P30085 196 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 HMOX2P30519 316 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 KRT6CP48668 564 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 CCR8P51685 355 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SMSP52788 366 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms