RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CAPZA2P47755 286 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 RPS6KA3P51812 740 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 RASSF6Q6ZTQ3 369 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 MDP1Q86V88 176 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 SLC22A24Q8N4F4 322 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 LILRB1Q8NHL6 650 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-220ENST00000471235 FNDC8Q8TC99 324 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 NSMAFQ92636 917 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 DUS3LQ96G46 650 aaKnown RBP17.22■□□□□ 0.35
HDAC7-220ENST00000471235 SLC38A2Q96QD8 506 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 PLA2G12AQ9BZM1 189 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 SEC61A2Q9H9S3 476 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 ST6GALNAC2Q9UJ37 374 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 MGAT4BQ9UQ53 548 aa17.22■□□□□ 0.35
HDAC7-220ENST00000471235 SLC22A23A1A5C7 686 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 PRSS37A4D1T9 235 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 SHISA9B4DS77 424 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 E2F6O75461 281 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 IGLV1-44P01699 117 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 THEM4Q5T1C6 240 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 RPL13AP3Q6NVV1 102 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 MYPOPQ86VE0 399 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-220ENST00000471235 CCDC36Q8IYA8 594 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 HS3ST5Q8IZT8 346 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 OR8D4Q8NGM9 314 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 NANOS1Q8WY41 292 aaKnown RBP17.21■□□□□ 0.35
HDAC7-220ENST00000471235 AKAP1Q92667 903 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC7-220ENST00000471235 NEUROG1Q92886 237 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 ERMAPQ96PL5 475 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-220ENST00000471235 RBP7Q96R05 134 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 NIPSNAP1Q9BPW8 284 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 IFT27Q9BW83 186 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 ARMC1Q9NVT9 282 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 B3GNT2Q9NY97 397 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 PDP1Q9P0J1 537 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-220ENST00000471235 PLEKHA6Q9Y2H5 1048 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 MAST4O15021 2626 aa17.21■□□□□ 0.35
HDAC7-220ENST00000471235 HS3ST1O14792 307 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 DEAF1O75398 565 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-220ENST00000471235 IGKV3-15P01624 115 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 CELA3BP08861 270 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 CECR9P0C854 216 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 OR8G3PP0DMU2 310 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 CD79AP11912 226 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 CBR1P16152 277 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 GSTM3P21266 225 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 PAX7P23759 505 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 CDAP32320 146 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 MRPS34P82930 218 aaKnown RBP17.2■□□□□ 0.34
HDAC7-220ENST00000471235 C3orf36Q3SXR2 165 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 FOXL2NBQ6ZUU3 175 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 PTCHD4Q6ZW05 846 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 ADCK1Q86TW2 530 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 SKA3Q8IX90 412 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-220ENST00000471235 FAM169BQ8N8A8 192 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 OR52L1Q8NGH7 329 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 FGFBP3Q8TAT2 258 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 NABP1Q96AH0 204 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 FEVQ99581 238 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 SH3GL3Q99963 347 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 NTN4Q9HB63 628 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 MOV10Q9HCE1 1003 aaKnown RBP17.2■□□□□ 0.34
HDAC7-220ENST00000471235 TBC1D23Q9NUY8 699 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 TEX15Q9BXT5 2789 aa17.2■□□□□ 0.34
HDAC7-220ENST00000471235 IMPA2O14732 288 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ARPC3O15145 178 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 AHCYL1O43865 530 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ENTPD5O75356 428 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 UBL3O95164 117 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ATE1O95260 518 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 FARS2O95363 451 aaKnown RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 SOX14O95416 240 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 RAF1P04049 648 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 TP53P04637 393 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 IGFBP1P08833 259 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 IDH3GP51553 393 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 CDH11P55287 796 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 KPNB1Q14974 876 aaKnown RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ATP6AP1Q15904 470 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 GSG1Q2KHT4 349 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 NRN1LQ496H8 165 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ZNF672Q499Z4 452 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 CLEC12AQ5QGZ9 265 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 SYT4Q9H2B2 425 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 DENND2DQ9H6A0 471 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 IL20Q9NYY1 176 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 VSX1Q9NZR4 365 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-220ENST00000471235 AP4S1Q9Y587 144 aa17.19■□□□□ 0.34
HDAC7-220ENST00000471235 ATP6V1G2-DDX39BF2Z307 99 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 BHLHE40O14503 412 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 PATE4P0C8F1 98 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 CTLA4P16410 223 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 ARR3P36575 388 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 CDKN2AP42771 156 aaKnown RBP17.18■□□□□ 0.34
HDAC7-220ENST00000471235 ACTR3P61158 418 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 PIGFQ07326 219 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 NPRL3Q12980 569 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 SHQ1Q6PI26 577 aaKnown RBP17.18■□□□□ 0.34
HDAC7-220ENST00000471235 SLC22A25Q6T423 547 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms