RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 RBM4BQ9BQ04 359 aaKnown RBP13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 MED18Q9BUE0 208 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 RBM4Q9BWF3 364 aaKnown RBP13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 NELFAQ9H3P2 528 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 ENOPH1Q9UHY7 261 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 H3BN98 237 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 ARHGEF9O43307 516 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 DHHO43323 396 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 QDPRP09417 244 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 EPXP11678 715 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 NOS3P29474 1203 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 ESRRGP62508 458 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 TAB1Q15750 504 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 C9orf135Q5VTT2 229 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 RBP7Q96R05 134 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 FOXB1Q99853 325 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 MOV10Q9HCE1 1003 aaKnown RBP13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 SLC17A5Q9NRA2 495 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF226Q9NYT6 803 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 TMEFF2Q9UIK5 374 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 AMDHD2Q9Y303 409 aa13.09□□□□□ -0.31
CDC42SE1-203ENST00000470278 SAC3D1A6NKF1 404 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SOCS2O14508 198 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 MGRN1O60291 552 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC2A10O95528 541 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 ALPLP05186 524 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 THBDP07204 575 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 IGFBP1P08833 259 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 HIST1H1CP16403 213 aaKnown RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 PAX7P23759 505 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 IGFBP5P24593 272 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 HOXC12P31275 282 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF84P51523 738 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 ARF1P84077 181 aaKnown RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 FMODQ06828 376 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 RCN1Q15293 331 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 ANKRD34AQ69YU3 496 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 FOXL2NBQ6ZUU3 175 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 C22orf34Q6ZV56 151 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 CCDC36Q8IYA8 594 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 LINC01560Q8TB33 94 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 CIB1Q99828 191 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SYT4Q9H2B2 425 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 TMEM38BQ9NVV0 291 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 UGT2A1Q9Y4X1 527 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
CDC42SE1-203ENST00000470278 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 H7C1C5 153 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 EI24O14681 340 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 ANPEPP15144 967 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 B4GALT1P15291 398 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 NPR2P20594 1047 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 CRYGSP22914 178 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 GRK5P34947 590 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 CDKN2AP42771 156 aaKnown RBP13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 ALDH3A2P51648 485 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 LCN6P62502 163 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 MRPS34P82930 218 aaKnown RBP13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 CDK5Q00535 292 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 MYBPC1Q00872 1141 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 DAG1Q14118 895 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 DAZAP2Q15038 168 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 PPA1Q15181 289 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 HIKESHIQ53FT3 197 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 KLHL24Q6TFL4 600 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR4K13Q8NH42 304 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 MUCL1Q96DR8 90 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 C14orf79Q96F83 325 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 CMC2Q9NRP2 79 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 KLHL21Q9UJP4 597 aa13.07□□□□□ -0.32
CDC42SE1-203ENST00000470278 WNT11O96014 354 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 RENP00797 406 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 IFNGP01579 166 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 CTLA4P16410 223 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms