RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 FAM168AQ92567 244 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 DOK1Q99704 481 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 DCAF13Q9NV06 445 aaKnown RBP12.14□□□□□ -0.47
COMMD3-208ENST00000470045 EGFL7Q9UHF1 273 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 UGT2A1Q9Y4X1 527 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 FKBP7Q9Y680 259 aa12.14□□□□□ -0.47
COMMD3-208ENST00000470045 A0A1W2PRQ8 180 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 INAFM1C9JVW0 142 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 hCG_2039718K7EN88 272 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 FARS2O95363 451 aaKnown RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 MMP7P09237 267 aaPredicted RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 SAGP10523 405 aaPredicted RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 NR2C1P13056 603 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 HSD17B1P14061 328 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 GLRXP35754 106 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 ZNF84P51523 738 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 DGCR6Q14129 220 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 RAB39AQ14964 217 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 IQCCQ4KMZ1 466 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 FAM205BPQ63HN1 556 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 GLYATQ6IB77 296 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 FAM86B1Q8N7N1 296 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 SLC7A13Q8TCU3 470 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 MRPL24Q96A35 216 aaKnown RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 NABP1Q96AH0 204 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 C7orf34Q96L11 122 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 DHRS1Q96LJ7 313 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 ALG12Q9BV10 488 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 GORASP2Q9H8Y8 452 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 NMNAT1Q9HAN9 279 aaPredicted RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 NDUFAF4Q9P032 175 aa12.13□□□□□ -0.47
COMMD3-208ENST00000470045 SAMD4AQ9UPU9 718 aaKnown RBP12.13□□□□□ -0.47
COMMD3-208ENST00000470045 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
COMMD3-208ENST00000470045 TRAV27A0A087WT01 109 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 EFCAB9A8MZ26 197 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 NDUFS8O00217 210 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CDC42EP2O14613 210 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CD5LO43866 347 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 GPRIN2O60269 458 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SLC2A10O95528 541 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SEMG1P04279 462 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 EVX1P49640 407 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 VLDLRP98155 873 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 FMODQ06828 376 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SLC25A47Q6Q0C1 308 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 TBPL2Q6SJ96 375 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 ZNF730Q6ZMV8 503 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 OAFQ86UD1 273 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CYP4Z1Q86W10 505 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 MEX3DQ86XN8 651 aaKnown RBP12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SVOPLQ8N434 492 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 RNF148Q8N7C7 305 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 OR13C2Q8NGS9 318 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 TSPAN32Q96QS1 320 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
COMMD3-208ENST00000470045 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CD300AQ9UGN4 299 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SLC7A8Q9UHI5 535 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 TAGLN3Q9UI15 199 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 MAGEL2Q9UJ55 1249 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
COMMD3-208ENST00000470045 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
COMMD3-208ENST00000470045 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 DCTN3O75935 186 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 SNAP29O95721 258 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 H1F0P07305 194 aaKnown RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 RHCEP18577 417 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 PCSK6P29122 969 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 GPR4P46093 362 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 LIMS1P48059 325 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 PDLIM4P50479 330 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 CTXN1P60606 82 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 CD47Q08722 323 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 TMEM53Q6P2H8 277 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms