RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 MCIDASD6RGH6 385 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ENTPD5O75356 428 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 TRMUO75648 421 aaKnown RBP11.36□□□□□ -0.59
CPSF4-210ENST00000469897 NCR1O76036 304 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 OR7A10O76100 309 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 PTHP01270 115 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ACADSP16219 412 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 CDAP32320 146 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 RAD52P43351 418 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 OR1E2P47887 323 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF84P51523 738 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 TAS2R41P59536 307 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 SELENOVP59797 346 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 CCL8P80075 99 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 PLP2Q04941 152 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 SF3A3Q12874 501 aaKnown RBP eCLIP11.36□□□□□ -0.598e-6■□□□□ 8.5
CPSF4-210ENST00000469897 DEF8Q6ZN54 512 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 CALHM3Q86XJ0 350 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ICA1LQ8NDH6 482 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 CPEB3Q8NE35 698 aaKnown RBP11.36□□□□□ -0.59
CPSF4-210ENST00000469897 OR1J2Q8NGS2 313 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 MOSPD2Q8NHP6 518 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF519Q8TB69 540 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM255BQ8WV15 326 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 C11orf40Q8WZ69 217 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 SGTBQ96EQ0 304 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 SH3GL1Q99961 368 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ECSITQ9BQ95 431 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 LRMDAQ9H2I8 198 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 HINT3Q9NQE9 182 aaKnown RBP11.36□□□□□ -0.59
CPSF4-210ENST00000469897 INIPQ9NRY2 104 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 C20orf141Q9NUB4 165 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 HIF1ANQ9NWT6 349 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF346Q9UL40 294 aaKnown RBP11.36□□□□□ -0.59
CPSF4-210ENST00000469897 RP2O75695 350 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 SLC2A10O95528 541 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 SAGP10523 405 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF250P15622 560 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 ITGA2P17301 1181 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 CCNOP22674 350 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 KLF3P57682 345 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-210ENST00000469897 LMO4P61968 165 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 SGCAQ16586 387 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 ARMC4Q5T2S8 1044 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 FAHD2BQ6P2I3 314 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 HDXQ7Z353 690 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 DPPA2Q7Z7J5 298 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 RBM15BQ8NDT2 890 aaKnown RBP11.35□□□□□ -0.59
CPSF4-210ENST00000469897 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 ASB10Q8WXI3 467 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 FAHD2AQ96GK7 314 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF583Q96ND8 569 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 SEPHS2Q99611 448 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM120AQ9BXJ8 343 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 KCNN2Q9H2S1 579 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 METTL17Q9H7H0 456 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-210ENST00000469897 GPR160Q9UJ42 338 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 BAG5Q9UL15 447 aa11.35□□□□□ -0.59
CPSF4-210ENST00000469897 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 LOC100653049A0A140TA62 436 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 HAX1O00165 279 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 KRT34O76011 436 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 OR5F1O95221 314 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 MSMBP08118 114 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-210ENST00000469897 GAAP10253 952 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 PCMT1P22061 227 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 APLNRP35414 380 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 RBM34P42696 430 aaKnown RBP11.34□□□□□ -0.59
CPSF4-210ENST00000469897 MRPS11P82912 194 aaKnown RBP11.34□□□□□ -0.59
CPSF4-210ENST00000469897 MVKQ03426 396 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 HSF2Q03933 536 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 NRN1LQ496H8 165 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 PABPC1L2AQ5JQF8 200 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 AVPI1Q5T686 147 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 NOXO1Q8NFA2 376 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 OR1J1Q8NGS3 322 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 NSMAFQ92636 917 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 GTF3AQ92664 365 aaKnown RBP11.34□□□□□ -0.59
CPSF4-210ENST00000469897 HDAC2Q92769 488 aaKnown RBP11.34□□□□□ -0.59
CPSF4-210ENST00000469897 LRRC37BQ96QE4 947 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF416Q9BWM5 594 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 BCL2L14Q9BZR8 327 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 C1orf198Q9H425 327 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 SLCO1C1Q9NYB5 712 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 UGT2A1Q9Y4X1 527 aa11.34□□□□□ -0.59
CPSF4-210ENST00000469897 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
CPSF4-210ENST00000469897 ARFGEF3Q5TH69 2177 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms