RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 POP5Q969H6 163 aaKnown RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 LRRC58Q96CX6 371 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 AURKBQ96GD4 344 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ANKRD27Q96NW4 1050 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 OR5B2Q96R09 309 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PIP5K1AQ99755 562 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 KCTD14Q9BQ13 255 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF559Q9BR84 538 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM185BQ9H7F4 350 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PROK2Q9HC23 129 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 SAR1AQ9NR31 198 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ACER3Q9NUN7 267 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ADA2Q9NZK5 511 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 KLHL9Q9P2J3 617 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 SPRR3Q9UBC9 169 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 CHRNA9Q9UGM1 479 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF443Q9Y2A4 671 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 HDGFL3Q9Y3E1 203 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF337Q9Y3M9 751 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 A3GALT2U3KPV4 340 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 LAMA5O15230 3695 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 GPR171O14626 319 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 TNFSF11O14788 317 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 OR2T1O43869 369 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZIC3O60481 467 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SNX3O60493 162 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FCMRO60667 390 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 OR6A2O95222 327 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 PGM3O95394 542 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 AHSA1O95433 338 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FAM107AO95990 144 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 TFP02787 698 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 LCATP04180 440 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 HIST1H2ABP04908 130 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 GPIP06744 558 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 TFPTP0C1Z6 253 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 COX4I1P13073 169 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 GPX2P18283 190 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 AQP1P29972 269 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SLC1A3P43003 542 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 STARP49675 285 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 LHX2P50458 406 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 GAS1P54826 345 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 MTPNP58546 118 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SLC35A1P78382 337 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FOXF1Q12946 379 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SKP2Q13309 424 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 CD226Q15762 336 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ESCO2Q56NI9 601 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SYT14P1Q58G82 188 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 HIST3H2AQ7L7L0 130 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SSX8Q7RTT4 187 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF367Q7RTV3 350 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ABHD12BQ7Z5M8 362 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZGRF1Q86YA3 2104 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF100Q8IYN0 542 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 C10orf53Q8N6V4 93 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 OR52E4Q8NGH9 312 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 OR10D3Q8NH80 312 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 LILRB4Q8NHJ6 448 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 GPR119Q8TDV5 335 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 C10orf82Q8WW14 230 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 OSTF1Q92882 214 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 HIST1H2ACQ93077 130 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FAM162AQ96A26 154 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 MCUR1Q96AQ8 359 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 INTS12Q96CB8 462 aaKnown RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ARSGQ96EG1 525 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 PERPQ96FX8 193 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 GMPPAQ96IJ6 420 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF317Q96PQ6 595 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 TUBA1CQ9BQE3 449 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FAM234AQ9H0X4 552 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 SLC38A1Q9H2H9 487 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 MCCC2Q9HCC0 563 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 BCL2L10Q9HD36 194 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 NGBQ9NPG2 151 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FLRT3Q9NZU0 649 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 VAPAQ9P0L0 249 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ARMCX1Q9P291 453 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 RPS6KA6Q9UK32 745 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 PROCRQ9UNN8 238 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 RNF6Q9Y252 685 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 FAM32AQ9Y421 112 aaKnown RBP5.52□□□□□ -1.53
PTCD3-208ENST00000469585 KCNE3Q9Y6H6 103 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 KALRNO60229 2985 aa5.52□□□□□ -1.53
PTCD3-208ENST00000469585 ZFHX4Q86UP3 3567 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 EXPH5Q8NEV8 1989 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 BOD1L1Q8NFC6 3051 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 SHANK1Q9Y566 2161 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TMED7-TICAM2A0A0A6YYA0 188 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RPS10-NUDT3A0A1W2PQS6 291 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ELOVL7A1L3X0 281 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 A8MVM7 634 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FAM220BPB1ANY3 271 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 MS4A18H0YCH9 400 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FAAHO00519 579 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TNFRSF13BO14836 293 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms