RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 EVPLLA8MZ36 301 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TGDSO95455 350 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 SNAP29O95721 258 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 BCL10O95999 233 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 PTHP01270 115 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ASAH2BP0C7U1 165 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ADRA2CP18825 462 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 PCBP3P57721 371 aaKnown RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TEKQ02763 1124 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 MELKQ14680 651 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 MOGQ16653 247 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 SLC36A2Q495M3 483 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 NRN1LQ496H8 165 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 RUNDC3AQ59EK9 446 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ENTPD8Q5MY95 495 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TMEM53Q6P2H8 277 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TTC33Q6PID6 262 aaPredicted RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 USP51Q70EK9 711 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 SLC16A14Q7RTX9 510 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 C1QL2Q7Z5L3 287 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 TSPYL5Q86VY4 417 aaPredicted RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 PTOV1Q86YD1 416 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 RBM45Q8IUH3 476 aaKnown RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 CPEB3Q8NE35 698 aaKnown RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 OR4M2Q8NGB6 313 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 OR4D11Q8NGI4 311 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 OR1J2Q8NGS2 313 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 NANPQ8TBE9 248 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 SNX33Q8WV41 574 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 MCHR2Q969V1 340 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 JMJD8Q96S16 334 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 EBF4Q9BQW3 602 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 BCL2L14Q9BZR8 327 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 LRMDAQ9H2I8 198 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 C1orf198Q9H425 327 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 SLCO1B3Q9NPD5 702 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 MED4Q9NPJ6 270 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 NANSQ9NR45 359 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 DECR2Q9NUI1 292 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ZNF446Q9NWS9 450 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ZNF229Q9UJW7 825 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 CORO2BQ9UQ03 480 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 ANGPT4Q9Y264 503 aa10.42□□□□□ -0.74
COL5A1-207ENST00000469093 IQCMA0A1B0GVH7 501 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 CPSF4LA6NMK7 179 aaKnown RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 J3QLI3 93 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 POLR3GO15318 223 aaPredicted RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 SASH3O75995 380 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 OPN1SWP03999 348 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 HIST1H2ABP04908 130 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 MMP7P09237 267 aaPredicted RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 LIMS1P48059 325 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 PLP2Q04941 152 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 TSTQ16762 297 aaKnown RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 HFEQ30201 348 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 AGKQ53H12 422 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 HIST3H2AQ7L7L0 130 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 LRRC18Q8N456 261 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ZDHHC22Q8N966 263 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 C11orf65Q8NCR3 313 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ICA1LQ8NDH6 482 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 RBM15BQ8NDT2 890 aaKnown RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ADAMTS16Q8TE57 1224 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 HIST1H2ACQ93077 130 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 TLCD1Q96CP7 247 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 RAB39BQ96DA2 213 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 C7orf26Q96N11 449 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ZNF347Q96SE7 839 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 SEPHS2Q99611 448 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 SLC6A7Q99884 636 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 CPPED1Q9BRF8 314 aaPredicted RBP10.41□□□□□ -0.74
COL5A1-207ENST00000469093 CCDC28BQ9BUN5 200 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 SUCNR1Q9BXA5 334 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 C7orf69Q9H7B7 122 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 ESM1Q9NQ30 184 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 OPN4Q9UHM6 478 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 SLC7A7Q9UM01 511 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
COL5A1-207ENST00000469093 TRAPPC13A5PLN9 417 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 CLDN25C9JDP6 229 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 BLOC1S5-TXNDC5H3BN57 136 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 KPNA4O00629 521 aaPredicted RBP10.4□□□□□ -0.74
COL5A1-207ENST00000469093 TPD52L2O43399 206 aaKnown RBP10.4□□□□□ -0.74
COL5A1-207ENST00000469093 KCNAB3O43448 404 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 MGRN1O60291 552 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 IGHG1P01857 330 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 DRD4P21917 467 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 ZNF81P51508 661 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 CLRN1P58418 232 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 GLO1Q04760 184 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 AWAT1Q58HT5 328 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 TMEM255AQ5JRV8 349 aa10.4□□□□□ -0.74
COL5A1-207ENST00000469093 DCAF12L2Q5VW00 463 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms