RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PANO1I0J062 215 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 FGF1P05230 155 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 MCF2P10911 925 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 PRDX3P30048 256 aaKnown RBP3.44□□□□□ -1.86
LSM5-209ENST00000468872 CYTH1Q15438 398 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 RNASEKQ6P5S7 137 aaKnown RBP3.44□□□□□ -1.86
LSM5-209ENST00000468872 TRIM40Q6P9F5 258 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 C19orf35Q6ZS72 473 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 TMEM61Q8N0U2 210 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 RASD2Q96D21 266 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 SLC35E1Q96K37 410 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 MBOAT4Q96T53 435 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 RASL11BQ9BPW5 248 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 NRIP2Q9BQI9 281 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 PELOQ9BRX2 385 aaKnown RBP3.44□□□□□ -1.86
LSM5-209ENST00000468872 GPR61Q9BZJ8 451 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 OR11A1Q9GZK7 315 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 ROGDIQ9GZN7 287 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 DEFB127Q9H1M4 99 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 SRMSQ9H3Y6 488 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 SIAEQ9HAT2 523 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 ADAP2Q9NPF8 381 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 MMP26Q9NRE1 261 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 CCL28Q9NRJ3 127 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 SLC2A8Q9NY64 477 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 CALYQ9NYX4 217 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 PEAK1Q9H792 1746 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 MYO5CQ9NQX4 1742 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 CDHR2Q9BYE9 1310 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 FANCIQ9NVI1 1328 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 USP24Q9UPU5 2620 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 RLFQ13129 1914 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 CCDC182A6NF36 153 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 PSTPIP1O43586 416 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 CIB2O75838 187 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 TNFSF13O75888 250 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 MOSP00540 346 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 IGHV2-5P01817 119 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 CRYGBP07316 175 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 ABOP16442 354 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 WNT4P56705 351 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 ERVK-25P63136 954 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 KCNJ2P63252 427 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 IRX3P78415 501 aaPredicted RBP3.43□□□□□ -1.86
LSM5-209ENST00000468872 BEX3Q00994 111 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 TMEM31Q5JXX7 168 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 ACP7Q6ZNF0 438 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 RAB3IL1Q8TBN0 382 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 NDRG1Q92597 394 aaKnown RBP3.43□□□□□ -1.86
LSM5-209ENST00000468872 RDH5Q92781 318 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 MYDGFQ969H8 173 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 PKNOX2Q96KN3 472 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 SORT1Q99523 831 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 MFFQ9GZY8 342 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 NXF3Q9H4D5 531 aaKnown RBP3.43□□□□□ -1.86
LSM5-209ENST00000468872 ABCB10Q9NRK6 738 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 ADAM22Q9P0K1 906 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 PRRC2AP48634 2157 aaKnown RBP3.43□□□□□ -1.86
LSM5-209ENST00000468872 OVOS2A0A0G2JMS6 1433 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 OVOS2A0A0J9YW53 1432 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 OVOS2Q6IE36 1432 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 SSH2Q76I76 1423 aa3.43□□□□□ -1.86
LSM5-209ENST00000468872 RRBP1Q9P2E9 1410 aaKnown RBP3.43□□□□□ -1.86
LSM5-209ENST00000468872 ZFYVE26Q68DK2 2539 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 ITPR3Q14573 2671 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 PIK3C2BO00750 1634 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 GJE1A6NN92 205 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 CCL21O00585 134 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 KLF8O95600 359 aaPredicted RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 INSP01308 110 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 ZNF17P17021 662 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 CCNE1P24864 410 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 HSD17B2P37059 387 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 NPBWR2P48146 333 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 PRMT2P55345 433 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 CKAP4Q07065 602 aaKnown RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 KIAA0087Q14695 138 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 TMEM107Q6UX40 140 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 SMIM5Q71RC9 77 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 ZNF557Q8N988 423 aaPredicted RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 NUP58Q9BVL2 599 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 TMEM59Q9BXS4 323 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 RANBP3Q9H6Z4 567 aaPredicted RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 NANOGQ9H9S0 305 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 EML4Q9HC35 981 aaKnown RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 RPS6KB2Q9UBS0 482 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 SLC25A15Q9Y619 301 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 PHF3Q92576 2039 aaKnown RBP3.42□□□□□ -1.86
LSM5-209ENST00000468872 ERBINQ96RT1 1412 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 NCOR1O75376 2440 aa3.42□□□□□ -1.86
LSM5-209ENST00000468872 ZFHX2Q9C0A1 2572 aaPredicted RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 MAP1BP46821 2468 aaKnown RBP3.41□□□□□ -1.86
LSM5-209ENST00000468872 A0A0G2JN53 185 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 HEATR9A2RTY3 570 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 C12orf71A8MTZ7 269 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 GOSR2O14653 212 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 ERLIN1O75477 346 aa3.41□□□□□ -1.86
LSM5-209ENST00000468872 SERPIND1P05546 499 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms