RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SRD5A1P18405 259 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 GIFP27352 417 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 APEX1P27695 318 aaKnown RBP18.73■□□□□ 0.59
TTC28-204ENST00000468807 SEC24CP53992 1094 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 GUCY1A3Q02108 690 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 FXNQ16595 210 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 ALKBH6Q3KRA9 238 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 FAM120AOSQ5T036 256 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 HDDC2Q7Z4H3 204 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 LRRC18Q8N456 261 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 POU5F2Q8N7G0 328 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 ICA1LQ8NDH6 482 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 MOSPD2Q8NHP6 518 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 SOX7Q9BT81 388 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 REPIN1Q9BWE0 567 aaKnown RBP18.73■□□□□ 0.59
TTC28-204ENST00000468807 MS4A5Q9H3V2 200 aa18.73■□□□□ 0.59
TTC28-204ENST00000468807 ELOVL7A1L3X0 281 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 HNF1AP20823 631 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 IFNA8P32881 189 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 TOP3AQ13472 1001 aaPredicted RBP18.72■□□□□ 0.59
TTC28-204ENST00000468807 TRIP10Q15642 601 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 RGS7BPQ6MZT1 257 aaPredicted RBP18.72■□□□□ 0.59
TTC28-204ENST00000468807 MICU2Q8IYU8 434 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 RBM15BQ8NDT2 890 aaKnown RBP18.72■□□□□ 0.59
TTC28-204ENST00000468807 TMEM158Q8WZ71 300 aa18.72■□□□□ 0.59
TTC28-204ENST00000468807 SLC2A10O95528 541 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 THRBP10828 461 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 NAT2P11245 290 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 IL2RGP31785 369 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 YAP1P46937 504 aaKnown RBP18.71■□□□□ 0.59
TTC28-204ENST00000468807 PLP2Q04941 152 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 CD47Q08722 323 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 CCNIQ14094 377 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 LAPTM4AQ15012 233 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 HIST3H3Q16695 136 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 NKPD1Q17RQ9 610 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 TBC1D28Q2M2D7 210 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 DPPA2Q7Z7J5 298 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 PAQR4Q8N4S7 273 aaPredicted RBP18.71■□□□□ 0.59
TTC28-204ENST00000468807 LZICQ8WZA0 190 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 NSMAFQ92636 917 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 MRPL13Q9BYD1 178 aaKnown RBP18.71■□□□□ 0.59
TTC28-204ENST00000468807 KCNN2Q9H2S1 579 aa18.71■□□□□ 0.59
TTC28-204ENST00000468807 IQCMA0A1B0GVH7 501 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 SLC22A23A1A5C7 686 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 LILRA1O75019 489 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 PTHP01270 115 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 HPXP02790 462 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 LCKP06239 509 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 TACSTD2P09758 323 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 IFI30P13284 250 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 CDAP32320 146 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 SELENOVP59797 346 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 SELENOWP63302 87 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 HSF2Q03933 536 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 ST3GAL3Q11203 375 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 RIN1Q13671 783 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 ALG10Q5BKT4 473 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 PHC2Q8IXK0 858 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 PRRC1Q96M27 445 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 LRMDAQ9H2I8 198 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 C1orf198Q9H425 327 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 ZNF446Q9NWS9 450 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 STX18Q9P2W9 335 aaKnown RBP18.7■□□□□ 0.58
TTC28-204ENST00000468807 RHCGQ9UBD6 479 aa18.7■□□□□ 0.58
TTC28-204ENST00000468807 CENPBD1B2RD01 187 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 ZNF682O95780 498 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 IGF2P01344 180 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 SAGP10523 405 aaPredicted RBP18.69■□□□□ 0.58
TTC28-204ENST00000468807 CCNOP22674 350 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 FMODQ06828 376 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 NRN1LQ496H8 165 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 HSP90B2PQ58FF3 399 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 ELFN2Q5R3F8 820 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 ARMC4Q5T2S8 1044 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 VTCN1Q7Z7D3 282 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 MEX3DQ86XN8 651 aaKnown RBP18.69■□□□□ 0.58
TTC28-204ENST00000468807 OR1J2Q8NGS2 313 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 BPIFA2Q96DR5 249 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 NARFLQ9H6Q4 476 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 CCNB1IP1Q9NPC3 277 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 CMTM6Q9NX76 183 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 TAAR3PQ9P1P4 343 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 GMPR2Q9P2T1 348 aaKnown RBP18.69■□□□□ 0.58
TTC28-204ENST00000468807 ZNF346Q9UL40 294 aaKnown RBP18.69■□□□□ 0.58
TTC28-204ENST00000468807 A4GNTQ9UNA3 340 aa18.69■□□□□ 0.58
TTC28-204ENST00000468807 GSTA4O15217 222 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 CLPTM1O96005 669 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 APLNRP35414 380 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 KLF3P57682 345 aaPredicted RBP18.68■□□□□ 0.58
TTC28-204ENST00000468807 ERVS71-1P61550 626 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 SGCAQ16586 387 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 CR1LQ2VPA4 569 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 ARPINQ7Z6K5 226 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 IGFN1Q86VF2 1251 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 LINC01356Q8N9X3 169 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 SYNPRQ8TBG9 265 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 LIPHQ8WWY8 451 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 HDAC2Q92769 488 aaKnown RBP18.68■□□□□ 0.58
TTC28-204ENST00000468807 HPS1Q92902 700 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms