RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TAF11Q15544 211 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 CARTPTQ16568 116 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 SLC36A2Q495M3 483 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 CYB5R2Q6BCY4 276 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 TMEM53Q6P2H8 277 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 RINLQ6ZS11 566 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 RBM15BQ8NDT2 890 aaKnown RBP16.47■□□□□ 0.23
COL7A1-207ENST00000467985 ASB10Q8WXI3 467 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 MCHR2Q969V1 340 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 MRPL24Q96A35 216 aaKnown RBP16.47■□□□□ 0.23
COL7A1-207ENST00000467985 BPIFA2Q96DR5 249 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 DNHD1Q96M86 4753 aa16.47■□□□□ 0.23
COL7A1-207ENST00000467985 SLC22A23A1A5C7 686 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 GYG2O15488 501 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 PTHP01270 115 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 ACADSP16219 412 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 RAB39AQ14964 217 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 DNAL1Q4LDG9 190 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 OR4K5Q8NGD3 323 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 GEMIN6Q8WXD5 167 aaKnown RBP16.46■□□□□ 0.23
COL7A1-207ENST00000467985 SH3GL3Q99963 347 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 FNDC11Q9BVV2 318 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 SMURF2Q9HAU4 748 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 SLC7A8Q9UHI5 535 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 A4GNTQ9UNA3 340 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 HIF3AQ9Y2N7 669 aa16.46■□□□□ 0.23
COL7A1-207ENST00000467985 CXCR6O00574 342 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 SYNGR3O43761 229 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 TRMUO75648 421 aaKnown RBP16.45■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF682O95780 498 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 DAOP14920 347 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 GZMKP49863 264 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF133P52736 654 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-207ENST00000467985 RUNX1T1Q06455 604 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 GGTLC2Q14390 218 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 TRAM2Q15035 370 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 FXNQ16595 210 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 ANKDD1AQ495B1 522 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 C10orf128Q5T292 105 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 ARMC4Q5T2S8 1044 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 SLC16A14Q7RTX9 510 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 CDK20Q8IZL9 346 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 OFCC1Q8IZS5 231 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 SYT14Q8NB59 555 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 MOSPD2Q8NHP6 518 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 FOXN4Q96NZ1 517 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF347Q96SE7 839 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 TXNIPQ9H3M7 391 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 MS4A5Q9H3V2 200 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 RNF121Q9H920 327 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 TMEM160Q9NX00 188 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 CDC42EP3Q9UKI2 254 aa16.45■□□□□ 0.22
COL7A1-207ENST00000467985 YLPM1P49750 1951 aaKnown RBP16.45■□□□□ 0.22
COL7A1-207ENST00000467985 SH3PXD2BA1X283 911 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 KIAA1324LA8MWY0 1029 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-207ENST00000467985 M0R233 179 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 NME4O00746 187 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 IFNA2P01563 188 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 ADRA2AP08913 450 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 PATE4P0C8F1 98 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 IFI30P13284 250 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 GIFP27352 417 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 PLP2Q04941 152 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 LAPTM4AQ15012 233 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 CHRFAM7AQ494W8 412 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 IQCCQ4KMZ1 466 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 IFI44LQ53G44 452 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 ALG10Q5BKT4 473 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 C8orf82Q6P1X6 216 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-207ENST00000467985 CBLL1Q75N03 491 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 VTCN1Q7Z7D3 282 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF584Q8IVC4 421 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 RNF113BQ8IZP6 322 aaKnown RBP16.44■□□□□ 0.22
COL7A1-207ENST00000467985 SLC30A7Q8NEW0 376 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 OR1J2Q8NGS2 313 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 FGFBP3Q8TAT2 258 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 FNDC8Q8TC99 324 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 KCNK17Q96T54 332 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 CDRT15Q96T59 188 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 KCTD14Q9BQ13 255 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-207ENST00000467985 MRPL37Q9BZE1 423 aaKnown RBP16.44■□□□□ 0.22
COL7A1-207ENST00000467985 C1orf21Q9H246 121 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 LRMDAQ9H2I8 198 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 KCNN2Q9H2S1 579 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 SIAEQ9HAT2 523 aa16.44■□□□□ 0.22
COL7A1-207ENST00000467985 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 IQCMA0A1B0GVH7 501 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 IGHV4-31P0DP07 118 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 SAGP10523 405 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-207ENST00000467985 GSK3BP49841 420 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 MRPS34P82930 218 aaKnown RBP16.43■□□□□ 0.22
COL7A1-207ENST00000467985 MYBPC1Q00872 1141 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 SAMD4BQ5PRF9 694 aaKnown RBP16.43■□□□□ 0.22
COL7A1-207ENST00000467985 FAM205BPQ63HN1 556 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 FKBP9P1Q75LS8 142 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 CYP4Z1Q86W10 505 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF786Q8N393 782 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 MCUR1Q96AQ8 359 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 ALG12Q9BV10 488 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms