RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 SH3GL3Q99963 347 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 ZNF426Q9BUY5 554 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 NARFLQ9H6Q4 476 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
RB1-202ENST00000467505 ZNF275Q9NSD4 429 aaPredicted RBP12.35□□□□□ -0.43
RB1-202ENST00000467505 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 TAAR3PQ9P1P4 343 aa12.35□□□□□ -0.43
RB1-202ENST00000467505 MYEF2Q9P2K5 600 aaKnown RBP12.35□□□□□ -0.43
RB1-202ENST00000467505 IGLV3-9A0A075B6K5 115 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
RB1-202ENST00000467505 IGF2P01344 180 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 IFNA14P01570 189 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 MT-ND1P03886 318 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 ZNF250P15622 560 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 ITGA2P17301 1181 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 RBM34P42696 430 aaKnown RBP12.34□□□□□ -0.43
RB1-202ENST00000467505 TAS2R41P59536 307 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 HSF2Q03933 536 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 VMACQ2NL98 169 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 METTL21CQ5VZV1 264 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 DEF8Q6ZN54 512 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 MEX3DQ86XN8 651 aaKnown RBP12.34□□□□□ -0.43
RB1-202ENST00000467505 RBM45Q8IUH3 476 aaKnown RBP12.34□□□□□ -0.43
RB1-202ENST00000467505 LRRC17Q8N6Y2 441 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 ZFAND2BQ8WV99 257 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 TAMM41Q96BW9 452 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 RAB39BQ96DA2 213 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 RACGAP1Q9H0H5 632 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 METTL17Q9H7H0 456 aaPredicted RBP12.34□□□□□ -0.43
RB1-202ENST00000467505 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
RB1-202ENST00000467505 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
RB1-202ENST00000467505 LYPD3O95274 346 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 THY1P04216 161 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 GAAP10253 952 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 ACADSP16219 412 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 FUT1P19526 365 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 IFNA8P32881 189 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 UCP2P55851 309 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
RB1-202ENST00000467505 SELPLGQ14242 412 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 HIST3H3Q16695 136 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 CCDC80Q76M96 950 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 RETREG3Q86VR2 466 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 OR4D11Q8NGI4 311 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 ZNF418Q8TF45 676 aaPredicted RBP12.33□□□□□ -0.44
RB1-202ENST00000467505 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 SGTBQ96EQ0 304 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 TIMD4Q96H15 378 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 LRRC37BQ96QE4 947 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 ECSITQ9BQ95 431 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 OR51B6Q9H340 312 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 SMURF2Q9HAU4 748 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 TREM2Q9NZC2 230 aa12.33□□□□□ -0.44
RB1-202ENST00000467505 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
RB1-202ENST00000467505 HTR3EA5X5Y0 456 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 RP2O75695 350 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 NCR1O76036 304 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 OR7A10O76100 309 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 OR5F1O95221 314 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 PNPP00491 289 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 F13BP05160 661 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 THRBP10828 461 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 GUCA1AP43080 201 aaPredicted RBP12.32□□□□□ -0.44
RB1-202ENST00000467505 CRYBB2P43320 205 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 MAGEB1P43366 347 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 ACSM5Q6NUN0 579 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 ERICH5Q6P6B1 374 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 CARM1Q86X55 608 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
RB1-202ENST00000467505 FNDC8Q8TC99 324 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
RB1-202ENST00000467505 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
RB1-202ENST00000467505 NANOGQ9H9S0 305 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 LPAR2Q9HBW0 351 aa12.32□□□□□ -0.44
RB1-202ENST00000467505 NPHS2Q9NP85 383 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms