RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ILKQ13418 452 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 HIKESHIQ53FT3 197 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 KLF17Q5JT82 389 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 LY6G6FQ5SQ64 297 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MARCH8Q5T0T0 291 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TSPO2Q5TGU0 170 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 PLCXD3Q63HM9 321 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TIGD3Q6B0B8 471 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 REEP3Q6NUK4 255 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TRIM40Q6P9F5 258 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 WDR74Q6RFH5 385 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF836Q6ZNA1 936 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 Q6ZSR3 168 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF571Q7Z3V5 609 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MICU2Q8IYU8 434 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 FAM71E2Q8N5Q1 922 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 Q8N9W7 124 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 OR10G3Q8NGC4 313 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 GPX8Q8TED1 209 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 GLYATL2Q8WU03 294 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 PHF10Q8WUB8 498 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 PIBF1Q8WXW3 757 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CHCHD10Q8WYQ3 142 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 KIAA1143Q96AT1 154 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SGK3Q96BR1 496 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CCDC126Q96EE4 140 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ITCHQ96J02 903 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 PRRC1Q96M27 445 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MS4A4EQ96PG1 132 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SORT1Q99523 831 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 HIST1H4GQ99525 98 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ATP5SQ99766 215 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC29A1Q99808 456 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 P2RY13Q9BPV8 354 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 KCTD14Q9BQ13 255 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TMEM59Q9BXS4 323 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MFFQ9GZY8 342 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 GBA3Q9H227 469 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 BLZF1Q9H2G9 400 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ELOVL6Q9H5J4 265 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 RNF167Q9H6Y7 350 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MRPL47Q9HD33 250 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MRPS30Q9NP92 439 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CCNB1IP1Q9NPC3 277 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 ADAP2Q9NPF8 381 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 CHRAC1Q9NRG0 131 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TUBG2Q9NRH3 451 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 GPATCH2LQ9NWQ4 482 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 AHSPQ9NZD4 102 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 KCNIP1Q9NZI2 227 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 LSM7Q9UK45 103 aaKnown RBP1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 TRAF3IP3Q9Y228 551 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 FRMPD3Q5JV73 1810 aa1.42□□□□□ -2.18
GTF3C3-209ENST00000466862 MROH5Q6ZUA9 1318 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CDHR2Q9BYE9 1310 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 IGLV3-22A0A075B6J6 115 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 TRBV9A0A0B4J1U6 114 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 A0A0G2JRQ6 117 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 KBTBD11-OT1A0A1B0GTJ5 212 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 NKX2-6A6NCS4 301 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 A6NIZ1 184 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 TMX2-CTNND1H3BSU7 103 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SIRPB1O00241 398 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CDC7O00311 574 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CCL21O00585 134 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 HCRTR1O43613 425 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 EEDO75530 441 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 TSPAN13O95857 204 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OTCP00480 354 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 IGKV1-17P01599 117 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 FGGP02679 453 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PCCAP05165 728 aaPredicted RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 GSTM3P21266 225 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CPN2P22792 545 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CMA1P23946 247 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CXCR2P25025 360 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CASQ1P31415 396 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 FOXN2P32314 431 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RORAP35398 523 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC1A1P43005 524 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 KIR2DS4P43632 304 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 MRPL19P49406 292 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 LHX2P50458 406 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF136P52737 540 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RAP1BP61224 184 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 YWHAGP61981 247 aaKnown RBP eCLIP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RAB11AP62491 216 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ERVK-25P63136 954 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 IRF8Q02556 426 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ACVR1Q04771 509 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 IFT88Q13099 833 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 UNC119Q13432 240 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ATP6AP1Q15904 470 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RAB11BQ15907 218 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 KLHL40Q2TBA0 621 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PPM1LQ5SGD2 360 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 C1orf100Q5SVJ3 147 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 C1orf146Q5VVC0 180 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 C22orf42Q6IC83 251 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 C11orf71Q6IPW1 123 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms