RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LOC100653049A0A140TA62 436 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 GMNCA6NCL1 334 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 FBP2O00757 339 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 PPIHO43447 177 aaKnown RBP15.07■□□□□ 0
COL7A1-206ENST00000466591 KRT34O76011 436 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 THY1P04216 161 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 SAGP10523 405 aaPredicted RBP15.07■□□□□ 0
COL7A1-206ENST00000466591 CCL2P13500 99 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 ACADSP16219 412 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 AQP2P41181 271 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 PIN1Q13526 163 aaPredicted RBP15.07■□□□□ 0
COL7A1-206ENST00000466591 TRIP10Q15642 601 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 MOGQ16653 247 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 COQ5Q5HYK3 327 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 LRFN4Q6PJG9 635 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 UNQ6126/PRO20091Q6UXV3 157 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 RINLQ6ZS11 566 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 OR2T12Q8NG77 320 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 SYNPRQ8TBG9 265 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 ZNF224Q9NZL3 707 aa15.07■□□□□ 0
COL7A1-206ENST00000466591 EIF3KQ9UBQ5 218 aaKnown RBP15.07■□□□□ 0
COL7A1-206ENST00000466591 TMEFF2Q9UIK5 374 aaPredicted RBP15.07■□□□□ 0
COL7A1-206ENST00000466591 ANK3Q12955 4377 aaKnown RBP15.06■□□□□ 0
COL7A1-206ENST00000466591 HAX1O00165 279 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 GSTA4O15217 222 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 TACSTD2P09758 323 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 ACHEP22303 614 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 SEC24CP53992 1094 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 UGT2B15P54855 530 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 ST3GAL3Q11203 375 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 KLF10Q13118 480 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 SGCAQ16586 387 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 CYBRD1Q53TN4 286 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 SHQ1Q6PI26 577 aaKnown RBP15.06■□□□□ 0
COL7A1-206ENST00000466591 GLCCI1Q86VQ1 547 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 LRP11Q86VZ4 500 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 NKAIN4Q8IVV8 208 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 C10orf82Q8WW14 230 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 ASB10Q8WXI3 467 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 NSMAFQ92636 917 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 PRSS27Q9BQR3 290 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 ZNF416Q9BWM5 594 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 BCL2L14Q9BZR8 327 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 MEPEQ9NQ76 525 aaPredicted RBP15.06■□□□□ 0
COL7A1-206ENST00000466591 DECR2Q9NUI1 292 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 FGFR1OP2Q9NVK5 253 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 SLCO1C1Q9NYB5 712 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 CAPN7Q9Y6W3 813 aa15.06■□□□□ 0
COL7A1-206ENST00000466591 CENPBD1B2RD01 187 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 B4DSR2 109 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 LILRA1O75019 489 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 LYPD3O95274 346 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 THRBP10828 461 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 GCH1P30793 250 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 IL2RGP31785 369 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 CDH15P55291 814 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 RIN1Q13671 783 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 FXNQ16595 210 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 NRN1LQ496H8 165 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 HSP90B2PQ58FF3 399 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 ALG10Q5BKT4 473 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 NHLRC1Q6VVB1 395 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 FGFBP3Q8TAT2 258 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 ZNF426Q9BUY5 554 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 LPAR2Q9HBW0 351 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 DNHD1Q96M86 4753 aa15.05■□□□□ -0
COL7A1-206ENST00000466591 FAM220BPB1ANY3 271 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 MGRN1O60291 552 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 CDC14BO60729 498 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 TRMUO75648 421 aaKnown RBP15.04■□□□□ -0
COL7A1-206ENST00000466591 HPXP02790 462 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 IFI30P13284 250 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 H2AFXP16104 143 aaPredicted RBP15.04■□□□□ -0
COL7A1-206ENST00000466591 THBS2P35442 1172 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 TEKQ02763 1124 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 SCGB2A2Q13296 93 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 PCGF3Q3KNV8 242 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 RRM2BQ7LG56 351 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 TSPYL5Q86VY4 417 aaPredicted RBP15.04■□□□□ -0
COL7A1-206ENST00000466591 ZNF584Q8IVC4 421 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 OR1J1Q8NGS3 322 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 ZNF519Q8TB69 540 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 ZNF75AQ96N20 296 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 RBP7Q96R05 134 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 SOX7Q9BT81 388 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 FNDC11Q9BVV2 318 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 NDEL1Q9GZM8 345 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 HINT3Q9NQE9 182 aaKnown RBP15.04■□□□□ -0
COL7A1-206ENST00000466591 C20orf141Q9NUB4 165 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 MYEF2Q9P2K5 600 aaKnown RBP15.04■□□□□ -0
COL7A1-206ENST00000466591 AP3M1Q9Y2T2 418 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 GRIP1Q9Y3R0 1128 aa15.04■□□□□ -0
COL7A1-206ENST00000466591 ATRQ13535 2644 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 PLSCR5A0PG75 271 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 ELOVL7A1L3X0 281 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 TCF21O43680 179 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 SLC2A10O95528 541 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 ZNF682O95780 498 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 IFNW1P05000 195 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 KDELR2P33947 212 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms