RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 WISP3O95389 354 aaPredicted RBP4.82□□□□□ -1.64
NCL-208ENST00000466274 CLIC3O95833 236 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 MBD3O95983 291 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 GPIP06744 558 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 UROSP10746 265 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 HSD3B1P14060 373 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ZNF250P15622 560 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 LIPAP38571 399 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 HTR3AP46098 478 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 FGF12P61328 243 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 BTG1P62324 171 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ACSM2AQ08AH3 577 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 EGFEM1PQ0D2K5 195 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 CAMK2DQ13557 499 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 GGTA1PQ4G0N0 100 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 SPIN4Q56A73 249 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 CCNJQ5T5M9 372 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ACSM2BQ68CK6 577 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 TTC27Q6P3X3 843 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 NIPAL3Q6P499 406 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 UNQ9370/PRO34162Q6UXP9 181 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 PIWIL3Q7Z3Z3 882 aaKnown RBP4.82□□□□□ -1.64
NCL-208ENST00000466274 GRINAQ7Z429 371 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 SNX32Q86XE0 403 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 TMEM139Q8IV31 216 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 DDIASQ8IXT1 998 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 GPR137CQ8N3F9 429 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ZIC4Q8N9L1 334 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 OR4C13Q8NGP0 309 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 RHEBL1Q8TAI7 183 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 C16orf78Q8WTQ4 265 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 MS4A4EQ96PG1 132 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ZNF385AQ96PM9 386 aaKnown RBP4.82□□□□□ -1.64
NCL-208ENST00000466274 ATOH8Q96SQ7 321 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 STACQ99469 402 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 NUDT16L1Q9BRJ7 211 aaKnown RBP4.82□□□□□ -1.64
NCL-208ENST00000466274 CHID1Q9BWS9 393 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 SLC19A3Q9BZV2 496 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 CAB39LQ9H9S4 337 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 A4GALTQ9NPC4 353 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 DUSP22Q9NRW4 184 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 GIN1Q9NXP7 522 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 VPREB3Q9UKI3 123 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 FOXJ3Q9UPW0 622 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 PSAT1Q9Y617 370 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
NCL-208ENST00000466274 ZNF99A8MXY4 864 aaPredicted RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 F5H0A9 414 aaPredicted RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 ENTPD5O75356 428 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 SLC43A1O75387 559 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 UPK3AO75631 287 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CLPTM1O96005 669 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 OTCP00480 354 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 PDYNP01213 254 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 HLA-HP01893 362 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 FGGP02679 453 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 LCKP06239 509 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 LIPFP07098 398 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 QDPRP09417 244 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 WNT2P09544 360 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 OR8G3PP0DMU2 310 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 PF4V1P10720 104 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ACP2P11117 423 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ZNF14P17017 642 aaPredicted RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 EPHA3P29320 983 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CRABP2P29373 138 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 MDH2P40926 338 aaKnown RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 KIR2DS4P43632 304 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ANXA11P50995 505 aaKnown RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 EFNB2P52799 333 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 SEC61A1P61619 476 aaKnown RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 PAX2Q02962 417 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ZNF763Q0D2J5 394 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 C2orf80Q0P641 193 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 HSPB3Q12988 150 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 DUSP5Q16690 384 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 NDUFAF6Q330K2 333 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ZFAND6Q6FIF0 208 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 NOXRED1Q6NXP6 359 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CDC73Q6P1J9 531 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 UNQ6126/PRO20091Q6UXV3 157 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 EIF3MQ7L2H7 374 aaKnown RBP4.81□□□□□ -1.64
NCL-208ENST00000466274 PDIK1LQ8N165 341 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 LYG1Q8N1E2 194 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 OR5R1Q8NH85 324 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CDKL2Q92772 493 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 DNAJA3Q96EY1 480 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CLPTM1LQ96KA5 538 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 MAGEB18Q96M61 343 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 PCGF1Q9BSM1 259 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 DESI2Q9BSY9 194 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CCDC106Q9BWC9 280 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 BCL2L14Q9BZR8 327 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 LRMDAQ9H2I8 198 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 RAB18Q9NP72 206 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 CTPS2Q9NRF8 586 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 TMEM106BQ9NUM4 274 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 MIOXQ9UGB7 285 aa4.81□□□□□ -1.64
NCL-208ENST00000466274 ZDHHC8Q9ULC8 765 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms