RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CT45A3Q8NHU0 189 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 DTX3LQ8TDB6 740 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ACMSDQ8TDX5 336 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 GEMIN6Q8WXD5 167 aaKnown RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 KIFAP3Q92845 792 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ASB9Q96DX5 294 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 MED8Q96G25 268 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 RARRES2Q99969 163 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ANP32EQ9BTT0 268 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 NXF3Q9H4D5 531 aaKnown RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 NTN4Q9HB63 628 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 PLSCR3Q9NRY6 295 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 SLC25A37Q9NYZ2 338 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 GCNT4Q9P109 453 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 STOX2Q9P2F5 926 aaPredicted RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF629Q9UEG4 869 aaPredicted RBP2.06□□□□□ -2.08
HDAC6-212ENST00000461608 PCYOX1Q9UHG3 505 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 KCNE3Q9Y6H6 103 aa2.06□□□□□ -2.08
HDAC6-212ENST00000461608 IGHV3-64DA0A0J9YX35 117 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 A0A1W2PNU3 283 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 PRSS37A4D1T9 235 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 LRRIQ4A6NIV6 560 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 KLHL41O60662 606 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 HUS1O60921 280 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 CLPXO76031 633 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 TSPAN13O95857 204 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 PLEKP08567 350 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 FGF4P08620 206 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 ANXA5P08758 320 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MYL2P10916 166 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 CCNB1P14635 433 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 F2RP25116 425 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 STOMP27105 288 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MAGEA1P43355 309 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 RORCP51449 518 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 FGF8P55075 233 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 HMGCS1Q01581 520 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 TWF1Q12792 350 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 FZD2Q14332 565 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 HSDL1Q3SXM5 330 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 TTLL9Q3SXZ7 439 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 TWF2Q6IBS0 349 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 REEP3Q6NUK4 255 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 OTUD6AQ7L8S5 288 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 OAFQ86UD1 273 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF429Q86V71 674 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 SLC7A13Q8TCU3 470 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 ACER1Q8TDN7 264 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 C8orf44Q96CB5 159 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 SEH1LQ96EE3 360 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 DNAJC1Q96KC8 554 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 PKNOX2Q96KN3 472 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 XPO6Q96QU8 1125 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MRPL37Q9BZE1 423 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 CLMPQ9H6B4 373 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MRPS30Q9NP92 439 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 FGF20Q9NP95 211 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 C20orf96Q9NUD7 363 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MTCH1Q9NZJ7 389 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 CCDC59Q9P031 241 aaKnown RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 LGALS13Q9UHV8 139 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 VANGL2Q9ULK5 521 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MAPK8IP3Q9UPT6 1336 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 MSH6P52701 1360 aa2.05□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF646O15015 1829 aaPredicted RBP2.05□□□□□ -2.08
HDAC6-212ENST00000461608 KBTBD11-OT1A0A1B0GTJ5 212 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 OR2AG2A6NM03 316 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 LAD1O00515 517 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 PES1O00541 588 aaKnown RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 TRAF3IP2O43734 574 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 RAB3DO95716 219 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 MOSP00540 346 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF30P17039 623 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 RCC1P18754 421 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 MDKP21741 143 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 GTF2E2P29084 291 aaKnown RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 HRH1P35367 487 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF133P52736 654 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ACTA2P62736 377 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 RPS21P63220 83 aaKnown RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ACTG2P63267 376 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ACTC1P68032 377 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ACTA1P68133 377 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 PAX5Q02548 391 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 GBE1Q04446 702 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 LIPEQ05469 1076 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 QPRTQ15274 297 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF658BQ4V348 819 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 PIGGQ5H8A4 983 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CYB5R2Q6BCY4 276 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 LCN12Q6JVE5 192 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 LYPD2Q6UXB3 125 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM150AQ86TG1 271 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 MKXQ8IYA7 352 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 JAGN1Q8N5M9 183 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CCDC148Q8NFR7 591 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 OR10G4Q8NGN3 311 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 OR4S2Q8NH73 311 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF502Q8TBZ5 544 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ACTRT1Q8TDG2 376 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms