RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SIAEQ9HAT2 523 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SCPEP1Q9HB40 452 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TOX4O94842 621 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CEBPBP17676 345 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ACHEP22303 614 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CTSCP53634 463 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 EDDM3AQ14507 147 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 KDM4DQ6B0I6 523 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TFAP2EQ6VUC0 442 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 FAM185AQ8N0U4 392 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 KLHDC1Q8N7A1 406 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SUMF1Q8NBK3 374 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 OR51I2Q9H344 312 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CDCP1Q9H5V8 836 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 PRSS21Q9Y6M0 314 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 M0QZ24 198 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 DOK2O60496 412 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CSO75390 466 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 JTBO76095 146 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NXPH3O95157 252 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PNPP00491 289 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 FPR3P25089 353 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 SLC5A2P31639 672 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NPY4RP50391 375 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CPEB2Q7Z5Q1 589 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TSEN54Q7Z6J9 526 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CLEC14AQ86T13 490 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 LMNTD1Q8N9Z9 388 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TSLPQ969D9 159 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 MED30Q96HR3 178 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 AKR1E2Q96JD6 320 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 C10orf90Q96M02 699 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NMNAT3Q96T66 252 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PAAF1Q9BRP4 392 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 LINC00597Q9H2U6 94 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CLCF1Q9UBD9 225 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ARHGEF28Q8N1W1 1705 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 C3P01024 1663 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ARPC3O15145 178 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 GLCEO94923 617 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 OR2F2O95006 317 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CALCBP10092 127 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 SPP1P10451 314 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 IVDP26440 423 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 OR2F1Q13607 317 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 VAMP3Q15836 100 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TAZQ16635 292 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 RAB6CQ53S08 254 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 H3F3CQ6NXT2 135 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 FBXO27Q8NI29 283 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PIGTQ969N2 578 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CCDC74BQ96LY2 380 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF583Q96ND8 569 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TXLNGYQ9BZA5 131 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 RAB18Q9NP72 206 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF230Q9UIE0 474 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 RNF24Q9Y225 148 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 H0YIV9 168 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 BCAT2O15382 392 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 AQP9O43315 295 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 GIPP09681 153 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PSMB5P28074 263 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ADRA1AP35348 466 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 DAPP51397 102 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 H3F3AP84243 136 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ERV3-1Q14264 604 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TOR2AQ5JU69 321 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 GLYATL3Q5SZD4 288 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF687Q8N1G0 1237 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ZADH2Q8N4Q0 377 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 UBTD2Q8WUN7 234 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 SLC25A43Q8WUT9 341 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 KCNE4Q8WWG9 221 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PRSS16Q9NQE7 514 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 MRPS2Q9Y399 296 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PPLO60437 1756 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TRABD2BA6NFA1 517 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TIMP1P01033 207 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TRAPPC2P0DI81 140 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TRAPPC2BP0DI82 140 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 POU3F3P20264 500 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NTF3P20783 257 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 REEP5Q00765 189 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PDZK1IP1Q13113 114 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PRAMEF20Q5VT98 475 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CDC20BQ86Y33 519 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 GOT1L1Q8NHS2 421 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 UTP4Q969X6 686 aaKnown RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 KCND3Q9UK17 655 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 URGCP-MRPS24S4R325 110 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF816-ZNF321PA0A0X1KG74 233 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM235A6NFC5 223 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 I6L893 689 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 CD14P08571 375 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NDUFB7P17568 137 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms