RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SLC22A31A6NKX4 558 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FAM90A27PA6NNH2 459 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 CASKO14936 926 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SLC16A7O60669 478 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 MITFO75030 526 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 PTHP01270 115 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ZNF823P16415 610 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 KLK2P20151 261 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FMO3P31513 532 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 GGT2P36268 569 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ZNF133P52736 654 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FXYD6P3P58550 94 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 POU4F2Q12837 409 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ZIK1Q3SY52 487 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SLC36A2Q495M3 483 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 MESTQ5EB52 335 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 PLXDC2Q6UX71 529 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 NHLRC1Q6VVB1 395 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 GABRG1Q8N1C3 465 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SDR9C7Q8NEX9 313 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 PROKR2Q8NFJ6 384 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 OR10H5Q8NGA6 315 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 OR8D4Q8NGM9 314 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FAM81AQ8TBF8 368 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 TMEM163Q8TC26 289 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 CYGBQ8WWM9 190 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ITLN2Q8WWU7 325 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 HSD17B8Q92506 261 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 OTULINQ96BN8 352 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 RASD2Q96D21 266 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 BOD1Q96IK1 185 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ALKBH3Q96Q83 286 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 NMNAT3Q96T66 252 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SLC29A1Q99808 456 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FOXB1Q99853 325 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 OPN3Q9H1Y3 402 aaPredicted RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SYT4Q9H2B2 425 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 NELFAQ9H3P2 528 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 SIAEQ9HAT2 523 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 FAM118AQ9NWS6 357 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ZNF226Q9NYT6 803 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 NDRG4Q9ULP0 352 aaKnown RBP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 AMDHD2Q9Y303 409 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 ATRXP46100 2492 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 KALRNO60229 2985 aa9.72□□□□□ -0.85
SMNDC1-203ENST00000460483 IRGMA1A4Y4 181 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 WIPF3A6NGB9 483 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 C12orf71A8MTZ7 269 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 TLX2O43763 284 aaPredicted RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 UBL3O95164 117 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SNAP29O95721 258 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 TP53P04637 393 aaPredicted RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 COX5AP20674 150 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 ATP6V1E1P36543 226 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CAPGP40121 348 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 RPS7P62081 194 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CSNK2BP67870 215 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 MRPS34P82930 218 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CRMP1Q14194 572 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 TIMM23BQ5SRD1 257 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 NXNL2Q5VZ03 156 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 C12orf73Q69YU5 71 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 ACSM5Q6NUN0 579 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 ZNF627Q7L945 461 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CXXC5Q7LFL8 322 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 BHLHA15Q7RTS1 189 aaPredicted RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SYT9Q86SS6 491 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 ALDH16A1Q8IZ83 802 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SLC37A3Q8NCC5 494 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 NPEPL1Q8NDH3 523 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 OR4Q3Q8NH05 313 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 MRPL48Q96GC5 212 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 MUS81Q96NY9 551 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 ADI1Q9BV57 179 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 RERGLQ9H628 205 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SEC61A2Q9H9S3 476 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SRA1Q9HD15 236 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 RPRD1BQ9NQG5 326 aaKnown RBP9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 PRSS50Q9UI38 385 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 RAB26Q9ULW5 256 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 PCDHGB1Q9Y5G3 927 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 HEATR5AQ86XA9 2040 aa9.71□□□□□ -0.86
SMNDC1-203ENST00000460483 SH3D21A4FU49 640 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 TUBAL3A6NHL2 446 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 UPK3AO75631 287 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 GOSR1O95249 250 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 HRGP04196 525 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 MSR1P21757 451 aa9.7□□□□□ -0.86
SMNDC1-203ENST00000460483 LAP3P28838 519 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms