RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 UTP23Q9BRU9 249 aaKnown RBP7.19□□□□□ -1.26
SFPQ-202ENST00000460428 TTYH2Q9BSA4 534 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 NAA11Q9BSU3 229 aaPredicted RBP7.19□□□□□ -1.26
SFPQ-202ENST00000460428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.19□□□□□ -1.26
SFPQ-202ENST00000460428 SMURF1Q9HCE7 757 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 SNTG1Q9NSN8 517 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 DEPPQ9NTK1 212 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 ACOXLQ9NUZ1 547 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 LRFN1Q9P244 771 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 KCNG2Q9UJ96 466 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 LAMP5Q9UJQ1 280 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
SFPQ-202ENST00000460428 ZNF281Q9Y2X9 895 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 MRPS18BQ9Y676 258 aaKnown RBP7.19□□□□□ -1.26
SFPQ-202ENST00000460428 OTOGLQ3ZCN5 2332 aa7.19□□□□□ -1.26
SFPQ-202ENST00000460428 TTC28Q96AY4 2481 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 A0A0G2JK05 382 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 A0A0J9YW62 118 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 TRBV2A0A0J9YWF9 115 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 TRBV5-5A0A0J9YX44 114 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 TVP23AA6NH52 213 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CD8B2A6NJW9 211 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 OR4C45A6NMZ5 311 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 FAM171A2A8MVW0 826 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 J3QRK9 145 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CASKO14936 926 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 SRSF10O75494 262 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ARL6IP5O75915 188 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ZNF432O94892 652 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 IGHG1P01857 330 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 RAF1P04049 648 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CLEC2LP0C7M8 214 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CD8BP10966 210 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CD37P11049 281 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 PSKH1P11801 424 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 APEX1P27695 318 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 RRADP55042 308 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 GFRA1P56159 465 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 NANOS3P60323 173 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 SLC3A1Q07837 685 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 HNRNPA0Q13151 305 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 RIN1Q13671 783 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MELKQ14680 651 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ETFDHQ16134 617 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ZNF181Q2M3W8 571 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CEP78Q5JTW2 689 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 C10orf128Q5T292 105 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 HBMQ6B0K9 141 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 TMEM225Q6GV28 225 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 RPTNQ6XPR3 784 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ESPNLQ6ZVH7 1005 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CREB3L2Q70SY1 520 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CEACAM19Q7Z692 300 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 GGNQ86UU5 652 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 GLB1L2Q8IW92 636 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 PARP16Q8N5Y8 322 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 IL22RA1Q8N6P7 574 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MINDY2Q8NBR6 621 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 NOXO1Q8NFA2 376 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 OR6N2Q8NGY6 317 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 RNF128Q8TEB7 428 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 THRSPQ92748 146 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 HAS2Q92819 552 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 TMEM54Q969K7 222 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 KIAA1143Q96AT1 154 aaPredicted RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 INTS12Q96CB8 462 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CMTM3Q96MX0 182 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 DCBLD2Q96PD2 775 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 ATF6BQ99941 703 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CCDC32Q9BV29 185 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MROQ9BYG7 248 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 C6orf62Q9GZU0 229 aaPredicted RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 PPIL3Q9H2H8 161 aaKnown RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MIXL1Q9H2W2 232 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 MED29Q9NX70 200 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 GNG8Q9UK08 70 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 DKKL1Q9UK85 242 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 BOKQ9UMX3 212 aaPredicted RBP7.18□□□□□ -1.26
SFPQ-202ENST00000460428 GRIP1Q9Y3R0 1128 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 WDFY3Q8IZQ1 3526 aa7.18□□□□□ -1.26
SFPQ-202ENST00000460428 CACNA1HO95180 2353 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 SPEGQ15772 3267 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 IGKV1D-43A0A0B4J1Z2 117 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 A0A0G2JMM0 328 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 A0A1W2PPB8 328 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 A0A1W2PRS3 328 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 PINLYPA6NC86 204 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 TMEM212A6NML5 194 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 KIR3DP1A8MWS1 328 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 ZNF879B4DU55 563 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 DVL2O14641 736 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 MAGEB4O15481 346 aaPredicted RBP7.17□□□□□ -1.26
SFPQ-202ENST00000460428 TLX3O43711 291 aaPredicted RBP7.17□□□□□ -1.26
SFPQ-202ENST00000460428 RAMP1O60894 148 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 TMCC2O75069 709 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 SERPINI2O75830 405 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 UPK1BO75841 260 aa7.17□□□□□ -1.26
SFPQ-202ENST00000460428 GLSO94925 669 aaPredicted RBP7.17□□□□□ -1.26
SFPQ-202ENST00000460428 ZFPL1O95159 310 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms